RNA–Protein interactions for RNA: ENST00000332695.11

CMTM1-202, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-202ENST00000332695 TSPAN3O60637 253 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 TYRP14679 529 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 L1CAMP32004 1257 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 EIF2DP41214 584 aaKnown RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 ZXDAP98168 799 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 MLF2Q15773 248 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 LRRC38Q5VT99 294 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 NADSYN1Q6IA69 706 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 RFWD3Q6PCD5 774 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 ZNF852Q6ZMS4 543 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 POLNQ7Z5Q5 900 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 RHOT1Q8IXI2 618 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 CCDC185Q8N715 623 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 CCDC26Q8TAB7 109 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 TRIM44Q96DX7 344 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 PRMT1Q99873 361 aaKnown RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 KCNF1Q9H3M0 494 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 DHX35Q9H5Z1 703 aaKnown RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 ZWILCHQ9H900 591 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 CD320Q9NPF0 282 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 ARHGEF3Q9NR81 526 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
CMTM1-202ENST00000332695 VANGL2Q9ULK5 521 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 GUCA1BQ9UMX6 200 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 TFR2Q9UP52 801 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 ALG6Q9Y672 507 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 DUSP10Q9Y6W6 482 aa14.55□□□□□ -0.08
CMTM1-202ENST00000332695 A0A1B0GVM2 712 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 TCAF2A6NFQ2 919 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 E9PAM4 449 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 SPECC1L-ADORA2AF8WAN1 911 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 DAPK3O43293 454 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 TBL1XO60907 577 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 SRGAP2O75044 1071 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 CLDN11O75508 207 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 PENKP01210 267 aaPredicted RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 COMTP21964 271 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 SLC6A4P31645 630 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 GJA4P35212 333 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 ARL4AP40617 200 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 VCPP55072 806 aaKnown RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 CDH18Q13634 790 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 KRT81Q14533 505 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 E2F5Q15329 346 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 RWDD4Q6NW29 188 aaKnown RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 FBXL22Q6P050 247 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 ARFGAP1Q8N6T3 406 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 TTC8Q8TAM2 541 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 EDAQ92838 391 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 TBC1D31Q96DN5 1066 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 NELL2Q99435 816 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 CATSPERBQ9H7T0 1116 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 LZTFL1Q9NQ48 299 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 DDX56Q9NY93 547 aaKnown RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 DEC1Q9P2X7 70 aa14.54□□□□□ -0.08
CMTM1-202ENST00000332695 PPARGC1AQ9UBK2 798 aaKnown RBP14.54□□□□□ -0.08
CMTM1-202ENST00000332695 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 H0Y626 953 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 H3BRJ5 948 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 GFRA2O00451 464 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 TRDMT1O14717 391 aaKnown RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 FGF10O15520 208 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 PSTPIP1O43586 416 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CREB3O43889 395 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CACNG3O60359 315 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CTHP32929 405 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CDH4P55283 916 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 TPI1P60174 286 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 SLC25A11Q02978 314 aaKnown RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 SIGLEC14Q08ET2 396 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 GRSF1Q12849 480 aaKnown RBP eCLIP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 ZNF177Q13360 481 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 PDK2Q15119 407 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 C5orf22Q49AR2 442 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 RAB6CQ53S08 254 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 PPP6R3Q5H9R7 873 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 FYB2Q5VWT5 728 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 GRAMD4Q6IC98 578 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 TPRG1Q6ZUI0 275 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 KCTD6Q8NC69 237 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 HSPH1Q92598 858 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 BHMTQ93088 406 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 PNKPQ96T60 521 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 P2RY13Q9BPV8 354 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 SNRNP25Q9BV90 132 aaKnown RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 ZYG11BQ9C0D3 744 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 RAB6CQ9H0N0 254 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 RCOR3Q9P2K3 495 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-202ENST00000332695 AMFRQ9UKV5 643 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CA14Q9ULX7 337 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 TRIOO75962 3097 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 CUL9Q8IWT3 2517 aa14.53□□□□□ -0.08
CMTM1-202ENST00000332695 IGLV3-10A0A075B6K4 115 aa14.52□□□□□ -0.09
CMTM1-202ENST00000332695 DRGXA6NNA5 263 aa14.52□□□□□ -0.09
CMTM1-202ENST00000332695 EEF2KO00418 725 aaKnown RBP14.52□□□□□ -0.09
CMTM1-202ENST00000332695 MOCS3O95396 460 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms