RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ARHGEF37A1IGU5 675 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 RNF103O00237 685 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 TGFB3P10600 412 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
VARS2-201ENST00000321897 CCR3P51677 355 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 DCTN2Q13561 401 aaKnown RBP15.65■□□□□ 0.1
VARS2-201ENST00000321897 CMC1Q7Z7K0 106 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 ZFP42Q96MM3 310 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 EBF3Q9H4W6 596 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 ZNF395Q9H8N7 513 aaPredicted RBP15.65■□□□□ 0.1
VARS2-201ENST00000321897 SP110Q9HB58 689 aa15.65■□□□□ 0.1
VARS2-201ENST00000321897 DOT1LQ8TEK3 1739 aa15.64■□□□□ 0.1
VARS2-201ENST00000321897 NFKBIEO00221 500 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 LYPLA2O95372 231 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 ZFXP17010 805 aaPredicted RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 IL1R2P27930 398 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 OR1G1P47890 313 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 OCA2Q04671 838 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 POTEAQ6S8J7 498 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 PHF13Q86YI8 300 aaPredicted RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 KLHL23Q8NBE8 558 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 CLEC4CQ8WTT0 213 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 KPNA7A9QM74 516 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 ZNF157P51786 506 aaPredicted RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 CSE1LP55060 971 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 LBRQ14739 615 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 CYP2R1Q6VVX0 501 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 SDCCAG3Q96C92 435 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 RMI1Q9H9A7 625 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 DDX43Q9NXZ2 648 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 UBQLN1Q9UMX0 589 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 PSMB4P28070 264 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 THPOP40225 353 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 PDK1Q15118 436 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 WSCD1Q658N2 575 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 TTC33Q6PID6 262 aaPredicted RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 C12orf56Q8IXR9 622 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 OR52K1Q8NGK4 314 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 MYO18AQ92614 2054 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
VARS2-201ENST00000321897 STX18Q9P2W9 335 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 URB1O60287 2271 aaKnown RBP15.64■□□□□ 0.09
VARS2-201ENST00000321897 WFS1O76024 890 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 CETPP11597 493 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PDPK2PQ6A1A2 396 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 B3GNT6Q6ZMB0 384 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 CTU1Q7Z7A3 348 aaKnown RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 DHDDSQ86SQ9 333 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 UNC5BQ8IZJ1 945 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 ATPAF2Q8N5M1 289 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 CPT1BQ92523 772 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PRDM5Q9NQX1 630 aaPredicted RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 PRKAG3Q9UGI9 489 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 COMMD3-BMI1R4GMX3 469 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 TM9SF1O15321 606 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 SH3BP5O60239 455 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 EPHX2P34913 555 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 SCARA3Q6AZY7 606 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PMF1Q6P1K2 205 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PHF21BQ96EK2 531 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 SEPT5Q99719 369 aaPredicted RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 ADARB2Q9NS39 739 aaKnown RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 NDUFA13Q9P0J0 144 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 SDR42E2A6NKP2 422 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 UGT1A9O60656 530 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 FAM58BPP0C7Q3 252 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 TSPAN8P19075 237 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PEX2P28328 305 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 RGS2P41220 211 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 GRIA1P42261 906 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 CHN2P52757 468 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 SDHAF4Q5VUM1 108 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PIGZQ86VD9 579 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 CDRT15Q96T59 188 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 TMEM79Q9BSE2 394 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 UGT1A7Q9HAW7 530 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 UGT1A10Q9HAW8 530 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 UGT1A8Q9HAW9 530 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 AFF4Q9UHB7 1163 aaKnown RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 CNTNAP1P78357 1384 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 SAC3D1A6NKF1 404 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 TOP3BO95985 862 aaKnown RBP15.63■□□□□ 0.09
VARS2-201ENST00000321897 CDKN2BP42772 138 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 DDHD1Q8NEL9 900 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 ULBP1Q9BZM6 244 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 PRDM12Q9H4Q4 367 aa15.63■□□□□ 0.09
VARS2-201ENST00000321897 IRS2Q9Y4H2 1338 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 PAPSS1O43252 624 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 TMEM63AO94886 807 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 TRUB2O95900 331 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 HSPA8P11142 646 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 TRIM16LQ309B1 348 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 HTR3CQ8WXA8 447 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 IFT43Q96FT9 208 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 APOPT1Q96IL0 206 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 FAM210AQ96ND0 272 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms