RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 SORBS2O94875 1100 aaKnown RBP19.98■□□□□ 0.79
ZNF554-201ENST00000317243 GPD1P21695 349 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 GABRB2P47870 512 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 ZNF143P52747 638 aaPredicted RBP19.98■□□□□ 0.79
ZNF554-201ENST00000317243 RBP5P82980 135 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 TNFAIP2Q03169 654 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 C1QTNF12Q5T7M4 302 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 USP50Q70EL3 339 aaPredicted RBP19.98■□□□□ 0.79
ZNF554-201ENST00000317243 CHSY1Q86X52 802 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 GPAMQ9HCL2 828 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 TMPRSS4Q9NRS4 437 aa19.98■□□□□ 0.79
ZNF554-201ENST00000317243 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 SPTLC1O15269 473 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 ATP9BO43861 1147 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 RGS2P41220 211 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 ARHGAP8P85298 464 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 SMAD1Q15797 465 aaKnown RBP19.97■□□□□ 0.79
ZNF554-201ENST00000317243 DARS2Q6PI48 645 aaKnown RBP19.97■□□□□ 0.79
ZNF554-201ENST00000317243 OR6B3Q8NGW1 331 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 FNIP1Q8TF40 1166 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 GDPD5Q8WTR4 605 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 SLC44A1Q8WWI5 657 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 USP6NLQ92738 828 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 UPF1Q92900 1129 aaKnown RBP eCLIP19.97■□□□□ 0.79
ZNF554-201ENST00000317243 RILPQ96NA2 401 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 ZDHHC7Q9NXF8 308 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 ZSWIM8A7E2V4 1837 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 PAPSS1O43252 624 aaPredicted RBP19.97■□□□□ 0.79
ZNF554-201ENST00000317243 CCDC166P0CW27 439 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 BST1Q10588 318 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 TMED1Q13445 227 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 BMPR2Q13873 1038 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 TAZQ16635 292 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 FBXL19Q6PCT2 694 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 CATSPER4Q7RTX7 472 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 KLHL4Q9C0H6 718 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 PTTG2Q9NZH5 202 aa19.97■□□□□ 0.79
ZNF554-201ENST00000317243 ZNF638Q14966 1978 aaKnown RBP19.97■□□□□ 0.79
ZNF554-201ENST00000317243 FKBP6O75344 327 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CHN2P52757 468 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 AQP5P55064 265 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 SLC25A3Q00325 362 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 INCA1Q0VD86 236 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 UBAP2LQ14157 1087 aaKnown RBP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 DNAL1Q4LDG9 190 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 DUS1LQ6P1R4 473 aaKnown RBP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 LCLAT1Q6UWP7 414 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 GBA2Q9HCG7 927 aaPredicted RBP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 VTA1Q9NP79 307 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 A0A088AWK7 358 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 H7C0C1 242 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 MCF2LO15068 1137 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 MAGEB3O15480 346 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 HNRNPCP07910 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 ATP5OP48047 213 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 GALK1P51570 392 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 IRX4P78413 519 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CHI3L2Q15782 390 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 FAM91A1Q658Y4 838 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 OLFML1Q6UWY5 402 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 TTC13Q8NBP0 860 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 SHCBP1Q8NEM2 672 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 ADAMTS10Q9H324 1103 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 USP29Q9HBJ7 922 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 APOC4-APOC2K7ER74 178 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 APOC2P02655 101 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 EPHB1P54762 984 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 SOWAHAQ2M3V2 549 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CES4AQ5XG92 561 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 B3GNT6Q6ZMB0 384 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 IFNLR1Q8IU57 520 aaPredicted RBP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 DNAJB3Q8WWF6 145 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CCDC124Q96CT7 223 aaKnown RBP19.96■□□□□ 0.79
ZNF554-201ENST00000317243 FLRT1Q9NZU1 646 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CNTN3Q9P232 1028 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 ITGA11Q9UKX5 1188 aa19.96■□□□□ 0.79
ZNF554-201ENST00000317243 CXorf49A8MYA2 514 aaPredicted RBP19.95■□□□□ 0.78
ZNF554-201ENST00000317243 RECQL4O94761 1208 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 LCP1P13796 627 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 RBL1P28749 1068 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 ATICP31939 592 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 BEX3Q00994 111 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 SLC18A2Q05940 514 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 TRIP10Q15642 601 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 TMEM259Q4ZIN3 620 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 KLHDC10Q6PID8 442 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 UGT2A3Q6UWM9 527 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 ZCCHC23Q6ZST2 131 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 SH2D5Q6ZV89 423 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 TRIM42Q8IWZ5 723 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PQLC3Q8N755 202 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PLD5Q8N7P1 536 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 FAF2Q96CS3 445 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PRICKLE1Q96MT3 831 aaPredicted RBP19.95■□□□□ 0.78
ZNF554-201ENST00000317243 SNRNP25Q9BV90 132 aaKnown RBP19.95■□□□□ 0.78
ZNF554-201ENST00000317243 VRTNQ9H8Y1 702 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 ASNSD1Q9NWL6 643 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 C15orf38-AP3S2A0A0A6YYH1 394 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PRPSAP2O60256 369 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms