RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RBM15Q96T37 977 aaKnown RBP eCLIP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 LPIN3Q9BQK8 851 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FGFBP2Q9BYJ0 223 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SMARCAD1Q9H4L7 1026 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PLEKHA5Q9HAU0 1116 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PNPLA8Q9NP80 782 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 GIMAP4Q9NUV9 329 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 RIC8BQ9NVN3 520 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TXNDC16Q9P2K2 825 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 A0A1B0GTW7 788 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 F5H6K3 240 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TMX2-CTNND1H3BSU7 103 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SNAP23O00161 211 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MEIS1O00470 390 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MSH4O15457 936 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ATE1O95260 518 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 HLA-DOAP06340 250 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CHRNB2P17787 502 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SLC9A1P19634 815 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 KLRC2P26717 231 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 KRT20P35900 424 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MLLT3P42568 568 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MAGEA6P43360 314 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SLC9A3P48764 834 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ATN1P54259 1190 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TAP1Q03518 808 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TBCCQ15814 346 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SEL1L2Q5TEA6 688 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 UBE2UQ5VVX9 321 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 METTL3Q86U44 580 aaKnown RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 AKAP14Q86UN6 197 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 FAM160B2Q86V87 743 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SNX32Q86XE0 403 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TTC9Q92623 222 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ZUFSPQ96AP4 578 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 OMA1Q96E52 524 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MUC3BQ9H195 1237 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 COG5Q9UP83 839 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SLC8A2Q9UPR5 921 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 POTEB3A0JP26 581 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ACOX3O15254 700 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 UNGP13051 313 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ICAM2P13598 275 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 RAG1P15918 1043 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 GARTP22102 1010 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 GRK2P25098 689 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 NUDT1P36639 197 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CACNB3P54284 484 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ESRRGP62508 458 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MYL7Q01449 175 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 BNIP3Q12983 259 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TFDP1Q14186 410 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 QRICH1Q2TAL8 776 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 PXDC1Q5TGL8 231 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 POTEBQ6S5H4 581 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CYS1Q717R9 158 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 USP37Q86T82 979 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TXNRD3Q86VQ6 643 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 PHF13Q86YI8 300 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ASCC1Q8N9N2 400 aaKnown RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 EPS8L1Q8TE68 723 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 NKD2Q969F2 451 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 YME1L1Q96TA2 773 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SYTL2Q9HCH5 934 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ERVK-5Q9HDB9 667 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 DNAJC12Q9UKB3 198 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SHOC2Q9UQ13 582 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 NAALADL1Q9UQQ1 740 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 AP3M1Q9Y2T2 418 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 MTO1Q9Y2Z2 717 aaKnown RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ANK1P16157 1881 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 FCHO1O14526 889 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TOMM70O94826 608 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 DHRS4L1P0CG22 281 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 KRT10P13645 584 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 AKR1B1P15121 316 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CTBSQ01459 385 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 GNA12Q03113 381 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 PDK1Q15118 436 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TRIP13Q15645 432 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 RABGAP1LQ5R372 815 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF618Q5T7W0 954 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 KRT39Q6A163 491 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 POLNQ7Z5Q5 900 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 SETD3Q86TU7 594 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 NDUFAF2Q8N183 169 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CCDC89Q8N998 374 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 GLIS3Q8NEA6 775 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 ALG3Q92685 438 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TRIM63Q969Q1 353 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 CFAP36Q96G28 342 aa6.82□□□□□ -1.32
ZNF540-201ENST00000316433 TM9SF2Q99805 663 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms