RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 HARS2P49590 506 aaKnown RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 EIF3BP55884 814 aaKnown RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 RING1Q06587 406 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 AP1B1Q10567 949 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 DPYSQ14117 519 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 ARHGEF18Q6ZSZ5 1173 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 TRMT10CQ7L0Y3 403 aaKnown RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 TMC3Q7Z5M5 1100 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 HOOK3Q86VS8 718 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 FCRL2Q96LA5 508 aaPredicted RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 QKIQ96PU8 341 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 DTLQ9NZJ0 730 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 NUDT5Q9UKK9 219 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 SHOC2Q9UQ13 582 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 NEU2Q9Y3R4 380 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 INSL5Q9Y5Q6 135 aa11.75□□□□□ -0.53
CTDSPL-202ENST00000310189 E7EVH7 732 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 PPFIA2O75334 1257 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 NEBLO76041 1014 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 LRIG2O94898 1065 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 ZDHHC11BP0C7U3 371 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 RBL1P28749 1068 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 ECHS1P30084 290 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 RPL22P35268 128 aaKnown RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 LMAN1P49257 510 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 SLC11A2P49281 568 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 ARL4CP56559 192 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 NRG1Q02297 640 aaPredicted RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 GBE1Q04446 702 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 TWF1Q12792 350 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 SEMA3BQ13214 749 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 RAB30Q15771 203 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 SNX30Q5VWJ9 437 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 HIBCHQ6NVY1 386 aaPredicted RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 KLHDC10Q6PID8 442 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 ZDHHC24Q6UX98 284 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 CENPUQ71F23 418 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 RTL10Q7L3V2 364 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 LRRC49Q8IUZ0 686 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 HTR3CQ8WXA8 447 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 RTP4Q96DX8 246 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 CCDC77Q9BR77 488 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 NEUROG2Q9H2A3 272 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 OSER1Q9NX31 292 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
CTDSPL-202ENST00000310189 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 FAM72CH0Y354 149 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 DCLK1O15075 740 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 GCATO75600 419 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 SASH3O75995 380 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 GLUD1P00367 558 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 HMBSP08397 361 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 CNPP09543 421 aaKnown RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 LINC00271P0C7V0 271 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 ZSCAN5DPP0CG00 497 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 ETS1P14921 441 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 IVDP26440 423 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 HSD17B3P37058 310 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 FDFT1P37268 417 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PBX2P40425 430 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 TUBP50607 506 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 MLLT6P55198 1093 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 EIF4EBP2Q13542 120 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 FAM72AQ5TYM5 149 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PDE12Q6L8Q7 609 aaKnown RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 FAM72DQ6L9T8 149 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 DNAJB7Q7Z6W7 309 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 FAM72BQ86X60 149 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PDIK1LQ8N165 341 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PSMG2Q969U7 264 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PLD4Q96BZ4 506 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 SLC39A13Q96H72 371 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 TTC25Q96NG3 672 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PBX4Q9BYU1 374 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 TLR9Q9NR96 1032 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
CTDSPL-202ENST00000310189 ZNF638Q14966 1978 aaKnown RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 GOLGA6CA6NDK9 693 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 ZNF840PA6NDX5 716 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 GOLGA8KD6RF30 607 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 E9PAM4 449 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 EIF3HO15372 352 aaKnown RBP eCLIP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 RRP9O43818 475 aaKnown RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 MFSD11O43934 449 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 OPHN1O60890 802 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms