RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 TRIM4Q9C037 500 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 WNT8AQ9H1J5 351 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 STN1Q9H668 368 aaKnown RBP9.4□□□□□ -0.9
MMP3-201ENST00000299855 DENND2DQ9H6A0 471 aaPredicted RBP9.4□□□□□ -0.9
MMP3-201ENST00000299855 LRRC19Q9H756 370 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 KCNK9Q9NPC2 374 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.4□□□□□ -0.9
MMP3-201ENST00000299855 COX16Q9P0S2 106 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 APOBEC2Q9Y235 224 aaKnown RBP9.4□□□□□ -0.9
MMP3-201ENST00000299855 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 ALG6Q9Y672 507 aa9.4□□□□□ -0.9
MMP3-201ENST00000299855 ADGRA3Q8IWK6 1321 aa9.4□□□□□ -0.91
MMP3-201ENST00000299855 IRAK2O43187 625 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CDH16O75309 829 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TTC4O95801 387 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 POU3F2P20265 443 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 TAC1P20366 129 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PTPN4P29074 926 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 EVI2BP34910 448 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PTGS2P35354 604 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CRKP46108 304 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ARHGDIBP52566 201 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 LRRC14Q15048 493 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 NFIL3Q16649 462 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 LRIT3Q3SXY7 679 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 Q4G0T1 1027 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SEL1L2Q5TEA6 688 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CGB2Q6NT52 195 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CLEC2AQ6UVW9 174 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ARHGAP36Q6ZRI8 547 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 STK32CQ86UX6 486 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 MFSD2AQ8NA29 543 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ANKLE1Q8NAG6 615 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 LNX1Q8TBB1 728 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 SLC7A6OSQ96CW6 309 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 C18orf8Q96DM3 657 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 EXOC2Q96KP1 924 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 C7orf26Q96N11 449 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ATP6V0BQ99437 205 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 GAS2L1Q99501 681 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 COQ7Q99807 217 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TMEM47Q9BQJ4 181 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TBC1D10AQ9BXI6 508 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CDC42EP4Q9H3Q1 356 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 RIOX1Q9H6W3 641 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 MKNK2Q9HBH9 465 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 RPRD1BQ9NQG5 326 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 COQ3Q9NZJ6 369 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PSME2Q9UL46 239 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 PCDHGA11Q9Y5H2 935 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 LAMB2P55268 1798 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SIGLEC16A6NMB1 481 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TRDMT1O14717 391 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 PGM3O95394 542 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ECDO95905 644 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 ALBP02768 609 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SERPINB2P05120 415 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PLA2G4BP0C869 781 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 TNFSF4P23510 183 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 MARK3P27448 753 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CHRNA5P30532 468 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CSNK2BP67870 215 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 CACNB1Q02641 598 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 GALNT3Q14435 633 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 ZNF267Q14586 743 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 KPNB1Q14974 876 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 BMT2Q1RMZ1 405 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 C2orf76Q3KRA6 126 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 FOXB2Q5VYV0 432 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 RHBDF2Q6PJF5 856 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 KIAA0319LQ8IZA0 1049 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 C19orf60Q96EN9 201 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 RBM41Q96IZ5 413 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 FAM84BQ96KN1 310 aaPredicted RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
MMP3-201ENST00000299855 VCX3AQ9NNX9 186 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PCOLCE2Q9UKZ9 415 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 PCDHA12Q9UN75 941 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 GMEB1Q9Y692 573 aa9.39□□□□□ -0.91
MMP3-201ENST00000299855 NRXN2Q9P2S2 1712 aa9.38□□□□□ -0.91
MMP3-201ENST00000299855 LCHNA4D1U4 455 aa9.38□□□□□ -0.91
MMP3-201ENST00000299855 POTEMA6NI47 508 aa9.38□□□□□ -0.91
MMP3-201ENST00000299855 APOL1O14791 398 aa9.38□□□□□ -0.91
MMP3-201ENST00000299855 SMAD6O43541 496 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms