RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 WNT7BP56706 349 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 MYBPC2Q14324 1141 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ZNF460Q14592 562 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 CERCAMQ5T4B2 595 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 PTRHD1Q6GMV3 140 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 IYDQ6PHW0 289 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 TPGS1Q6ZTW0 290 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 AGAP11Q8TF27 550 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 MRIQ9BWK5 157 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 OSBPL7Q9BZF2 842 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ZNF518BQ9C0D4 1074 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ING2Q9H160 280 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ADNPQ9H2P0 1102 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 FAM96AQ9H5X1 160 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 XAB2Q9HCS7 855 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 CCDC167Q9P0B6 97 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 OR12D3Q9UGF7 316 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ATP6AP2A0A1C7CYW4 349 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 TCRBV9S1A1TA0A576 114 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 PFDN1O60925 122 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ATP6AP2O75787 350 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 CPA3P15088 417 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 EIF4BP23588 611 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 PPP3CCP48454 512 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 HARS2P49590 506 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 ZNF268Q14587 947 aaPredicted RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 FKBP1CQ5VVH2 108 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 XYLT1Q86Y38 959 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 SCUBE1Q8IWY4 988 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 AGGF1Q8N302 714 aaeCLIP4.9□□□□□ -1.62
UBR1-201ENST00000290650 TTC39CQ8N584 583 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 KCTD17Q8N5Z5 321 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 KLHL5Q96PQ7 755 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 MRPL1Q9BYD6 325 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 MAGEB5Q9BZ81 275 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 PRDM12Q9H4Q4 367 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 SYBUQ9NX95 663 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ST3GAL5Q9UNP4 418 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 COL18A1P39060 1754 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 MICAL3Q7RTP6 2002 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 APOC4-APOC2K7ER74 178 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GPR182O15218 404 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 PRPF4O43172 522 aaKnown RBP eCLIP4.9□□□□□ -1.63
UBR1-201ENST00000290650 APOC2P02655 101 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 HMOX2P30519 316 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CCR1P32246 355 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GRK4P32298 578 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 ELF3P78545 371 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 PHEXP78562 749 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 FLOT2Q14254 428 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CA9Q16790 459 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 DNAJC14Q6Y2X3 702 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 OTOP3Q7RTS5 596 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 RIBC1Q8N443 379 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 SH3TC2Q8TF17 1288 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 PBXIP1Q96AQ6 731 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 TUBGCP3Q96CW5 907 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 TWNKQ96RR1 684 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 EFHD1Q9BUP0 239 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 LRRC19Q9H756 370 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GPBP1L1Q9HC44 474 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 AVENQ9NQS1 362 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 RNF112Q9ULX5 631 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 A0A096LPK6 155 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 MYO1GB0I1T2 1018 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 C9JVG2 144 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 DNM1LO00429 736 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CES2O00748 559 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 SRP72O76094 671 aaKnown RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 PROCP04070 461 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CLCNKBP51801 687 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 OAZ1P54368 228 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 SEMG2Q02383 582 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CDH18Q13634 790 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 UNC5AQ6ZN44 842 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 RNF157Q96PX1 679 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 DDX50Q9BQ39 737 aaKnown RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 GPAMQ9HCL2 828 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 ARHGAP28Q9P2N2 729 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 PLCH1Q4KWH8 1693 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 SNX3O60493 162 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 LMNAP02545 664 aaKnown RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 MMP8P22894 467 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 IL1R2P27930 398 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CD86P42081 329 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GRIA1P42261 906 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 ALDH1A3P47895 512 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GSSP48637 474 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 ZNF143P52747 638 aaPredicted RBP4.9□□□□□ -1.63
UBR1-201ENST00000290650 FCGRTP55899 365 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 GALNT3Q14435 633 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 CCDC142Q17RM4 750 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 RAB6CQ53S08 254 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 DET1Q7L5Y6 550 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 MPP5Q8N3R9 675 aa4.9□□□□□ -1.63
UBR1-201ENST00000290650 DCBLD1Q8N8Z6 715 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms