RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PSMB4P28070 264 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 SERPINB3P29508 390 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 NOS2P35228 1153 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 CDK16Q00536 496 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 CTC1Q2NKJ3 1217 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 KIAA0319Q5VV43 1072 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 CLEC20AQ6ZU45 233 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 TP53INP2Q8IXH6 220 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 MTBPQ96DY7 904 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 P2RY11Q96G91 374 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 OXNAD1Q96HP4 312 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 NPY6RQ99463 290 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 TBC1D10AQ9BXI6 508 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 AP5M1Q9H0R1 490 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 KCNK13Q9HB14 408 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 PIGVQ9NUD9 493 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 ARL8BQ9NVJ2 186 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.28
CPSF6-201ENST00000266679 CCND1P24385 295 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 CPT1AP50416 773 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 SERPINB9P50453 376 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 TMPRSS15P98073 1019 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 CHI3L2Q15782 390 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 BZW1Q7L1Q6 419 aaKnown RBP13.27□□□□□ -0.28
CPSF6-201ENST00000266679 RNF169Q8NCN4 708 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 SLC7A14Q8TBB6 771 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.28
CPSF6-201ENST00000266679 SKA1Q96BD8 255 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.27□□□□□ -0.282e-6■■■□□ 15.6
CPSF6-201ENST00000266679 MKS1Q9NXB0 559 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.28
CPSF6-201ENST00000266679 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 STAP1Q9ULZ2 295 aa13.27□□□□□ -0.28
CPSF6-201ENST00000266679 MTO1Q9Y2Z2 717 aaKnown RBP13.27□□□□□ -0.28
CPSF6-201ENST00000266679 FAM237BA0A1B0GVD1 139 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 NRP1O14786 923 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 WFS1O76024 890 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 TGDSO95455 350 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 ANP32DO95626 131 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 DLDP09622 509 aaKnown RBP13.27□□□□□ -0.29
CPSF6-201ENST00000266679 FAM200BP0CF97 657 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 MYL2P10916 166 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 LRPAP1P30533 357 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 RASSF2P50749 326 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 TKTL1P51854 596 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 IRX4P78413 519 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 BST1Q10588 318 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 CES4AQ5XG92 561 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 FAM13CQ8NE31 585 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 WNT8BQ93098 351 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 E2F7Q96AV8 911 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 PPP1R10Q96QC0 940 aaKnown RBP13.27□□□□□ -0.29
CPSF6-201ENST00000266679 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 PAK6Q9NQU5 681 aaPredicted RBP13.27□□□□□ -0.29
CPSF6-201ENST00000266679 SAR1AQ9NR31 198 aa13.27□□□□□ -0.29
CPSF6-201ENST00000266679 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.29
CPSF6-201ENST00000266679 KLF11O14901 512 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 OPHN1O60890 802 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 PTPN4P29074 926 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 MLH1P40692 756 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 DPYSQ14117 519 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 PDK1Q15118 436 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 MARK2Q7KZI7 788 aaKnown RBP13.26□□□□□ -0.29
CPSF6-201ENST00000266679 GPRIN1Q7Z2K8 1008 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 PSTKQ8IV42 348 aaKnown RBP13.26□□□□□ -0.29
CPSF6-201ENST00000266679 NUDCD3Q8IVD9 361 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 TRIM42Q8IWZ5 723 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 APBB2Q92870 758 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 PGBD4Q96DM1 585 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 ZNF395Q9H8N7 513 aaPredicted RBP13.26□□□□□ -0.29
CPSF6-201ENST00000266679 SYBUQ9NX95 663 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 LNPEPQ9UIQ6 1025 aa13.26□□□□□ -0.29
CPSF6-201ENST00000266679 TIMM13Q9Y5L4 95 aaPredicted RBP13.26□□□□□ -0.29
CPSF6-201ENST00000266679 SDR42E2A6NKP2 422 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FAM72CH0Y354 149 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 CAPN9O14815 690 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PPP1R12AO14974 1030 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 AP1G2O75843 785 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 IL1BP01584 269 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 MLNP12872 115 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 GLUD2P49448 558 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 IFRD2Q12894 506 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms