RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PCP4L1A6NKN8 68 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DNAJB2P25686 324 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PSMC5P62195 406 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 MYBPC3Q14896 1274 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PKN1Q16512 942 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SDE2Q6IQ49 451 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ZNF280DQ6N043 979 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 RDH11Q8TC12 318 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 FAM84BQ96KN1 310 aaPredicted RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 DGCR6LQ9BY27 220 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 ACAD9Q9H845 621 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 PRDM16Q9HAZ2 1276 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 CD320Q9NPF0 282 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 VAV3Q9UKW4 847 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 RABL2BQ9UNT1 228 aa10.94□□□□□ -0.66
CPT1A-201ENST00000265641 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
CPT1A-201ENST00000265641 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 TCEA3O75764 348 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 IFNA14P01570 189 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 MAPK1P28482 360 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CD97P48960 835 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 PSME3P61289 254 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CDK18Q07002 472 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 LGALS3BPQ08380 585 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ZNF57Q68EA5 555 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 TOR1AIP2Q8NFQ8 470 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 IRGQQ8WZA9 623 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CCDC177Q9NQR7 707 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 AGPAT3Q9NRZ7 376 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 FER1L4A9Z1Z3 1794 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 TCP10L2B9ZVM9 353 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 PSMD12O00232 456 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 BBOX1O75936 387 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 EPN2O95208 641 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ATG7O95352 703 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 NTRK1P04629 796 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ATF6P18850 670 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 RRM2P31350 389 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ZNF543Q08ER8 600 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SEC23AQ15436 765 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SMAD1Q15797 465 aaKnown RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CACHD1Q5VU97 1274 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CRTC3Q6UUV7 619 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 FRMD7Q6ZUT3 714 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 STK32CQ86UX6 486 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CHSY1Q86X52 802 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CPNE1Q99829 537 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SYT15Q9BQS2 421 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ACAT2Q9BWD1 397 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 EBF3Q9H4W6 596 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 DNAJC18Q9H819 358 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 IL1RL2Q9HB29 575 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 DNAJC28Q9NX36 388 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 VPS9D1Q9Y2B5 631 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 STXBP5LQ9Y2K9 1186 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SF3B1O75533 1304 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■■■■ 160.4
CPT1A-201ENST00000265641 FAM237BA0A1B0GVD1 139 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SOAT2O75908 522 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CASP4P49662 377 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 RPL14P50914 215 aaKnown RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 KATNAL2Q8IYT4 538 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 TBC1D21Q8IYX1 336 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 FAM47BQ8NA70 645 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 MRPL48Q96GC5 212 aaKnown RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 PIGUQ9H490 435 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SMARCAD1Q9H4L7 1026 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 TMEM161AQ9NX61 479 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 FETUBQ9UGM5 382 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 GSTK1Q9Y2Q3 226 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 UBA6A0AVT1 1052 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 BBIP1A8MTZ0 92 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ABCB7O75027 752 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 S100A6P06703 90 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 GPC3P51654 580 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 GTF2H3Q13889 308 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 AMIGO2Q86SJ2 522 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SPATA20Q8TB22 786 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 BLOC1S5Q8TDH9 187 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SKA2Q8WVK7 121 aaPredicted RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 ACSS3Q9H6R3 686 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CDH22Q9UJ99 828 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 VPS4AQ9UN37 437 aa10.93□□□□□ -0.66
CPT1A-201ENST00000265641 SETD1BQ9UPS6 1966 aaKnown RBP10.93□□□□□ -0.66
CPT1A-201ENST00000265641 CAPN8A6NHC0 703 aa10.92□□□□□ -0.66
CPT1A-201ENST00000265641 F5H423 210 aaPredicted RBP10.92□□□□□ -0.66
CPT1A-201ENST00000265641 INPP4BO15327 924 aa10.92□□□□□ -0.66
CPT1A-201ENST00000265641 DGKDQ16760 1214 aa10.92□□□□□ -0.66
CPT1A-201ENST00000265641 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
CPT1A-201ENST00000265641 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
CPT1A-201ENST00000265641 IFT43Q96FT9 208 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms