RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GPR20Q99678 358 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ZNF446Q9NWS9 450 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 MARCH2Q9P0N8 246 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 TAGLN3Q9UI15 199 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 TRIM17Q9Y577 477 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 GRM5P41594 1212 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 SKOR1P84550 965 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 AMPD2Q01433 879 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 CYLC2Q14093 348 aaPredicted RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 SLC30A9Q6PML9 568 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 RNF157Q96PX1 679 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 PLIN4Q96Q06 1357 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 A0A0A0MRY4 1105 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TRDMT1O14717 391 aaKnown RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 SPATA13Q96N96 652 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 APBA2Q99767 749 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TBL1YQ9BQ87 522 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TMEM161AQ9NX61 479 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 GOLGA8TH3BQL2 631 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 SPTLC1O15269 473 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TRIM13O60858 407 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 NME5P56597 212 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 CCDC153Q494R4 210 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TMEM139Q8IV31 216 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 SLC22A9Q8IVM8 553 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 PHF21BQ96EK2 531 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 TEKT2Q9UIF3 430 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 CDH9Q9ULB4 789 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 DDHD2O94830 711 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 MYBL2P10244 700 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 CRYBB1P53674 252 aaPredicted RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 NPY5RQ15761 445 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 BNC2Q6ZN30 1099 aaPredicted RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 PPTC7Q8NI37 304 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 ALG3Q92685 438 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 COL20A1Q9P218 1284 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 CTNNAL1Q9UBT7 734 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 DOLKQ9UPQ8 538 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 CHADO15335 359 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 ADRA1DP25100 572 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 CLK2P49760 499 aaKnown RBP14.31□□□□□ -0.12
CDH3-201ENST00000264012 FKBP1BP68106 108 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 POLNQ7Z5Q5 900 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 LRRC52Q8N7C0 313 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 C12orf29Q8N999 325 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 SLC7A5P2Q9GIP4 190 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
CDH3-201ENST00000264012 MT-CO1P00395 513 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 SOAT1P35610 550 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 SLC1A6P48664 564 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 DRG2P55039 364 aaKnown RBP14.3□□□□□ -0.12
CDH3-201ENST00000264012 FUT11Q495W5 492 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 DUSP28Q4G0W2 176 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 C16orf87Q6PH81 154 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TNIP2Q8NFZ5 429 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 LPPQ93052 612 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 C16orf96A6NNT2 1141 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 FSCN2O14926 492 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 PTPN4P29074 926 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 CDK16Q00536 496 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 PRKAA1Q13131 559 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TCF7L2Q9NQB0 619 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 THAP1Q9NVV9 213 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 HNRNPCL2B2RXH8 293 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TBC1D4O60343 1298 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 CKBP12277 381 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 PSMB4P28070 264 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 CYP2C18P33260 490 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TAS2R40P59535 323 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 DMC1Q14565 340 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TTMPQ5BVD1 217 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 RNPEPQ9H4A4 650 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 PLA2G4CQ9UP65 541 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 hCG_1818297A0A087WSY0 165 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 CRABP2P29373 138 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 HGSNATQ68CP4 663 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 DUPD1Q68J44 220 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 ZNF75CPQ92670 426 aaPredicted RBP14.3□□□□□ -0.12
CDH3-201ENST00000264012 ZNF556Q9HAH1 456 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 TMEM51Q9NW97 253 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 BLOC1S6Q9UL45 172 aa14.3□□□□□ -0.12
CDH3-201ENST00000264012 KDM1AO60341 852 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms