RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NPNTQ6UXI9 565 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 PLD5Q8N7P1 536 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 GPR152Q8TDT2 470 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 SEPT5Q99719 369 aaPredicted RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 TRIM62Q9BVG3 475 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 MAK16Q9BXY0 300 aaKnown RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 FRMD8P1Q9BZ68 369 aaPredicted RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 FAM204AQ9H8W3 233 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 DDIT4Q9NX09 232 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 FAM53CQ9NYF3 392 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 DNMT3BQ9UBC3 853 aaKnown RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 FEZ2Q9UHY8 353 aaPredicted RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 ITGAVP06756 1048 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 IVDP26440 423 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 EIF4EBP2Q13542 120 aaPredicted RBP18.06■□□□□ 0.48
SRSF1-201ENST00000258962 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 TRIP13Q15645 432 aaPredicted RBP18.06■□□□□ 0.48
SRSF1-201ENST00000258962 GET4Q7L5D6 327 aaPredicted RBP18.06■□□□□ 0.48
SRSF1-201ENST00000258962 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 ALLCQ8N6M5 410 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 CSPG4P5Q96PW8 444 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 ABCC13Q9NSE7 274 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 HCFC1R1Q9NWW0 138 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 OSER1Q9NX31 292 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 CWC15Q9P013 229 aaKnown RBP18.06■□□□□ 0.48
SRSF1-201ENST00000258962 ZNF148Q9UQR1 794 aa18.06■□□□□ 0.48
SRSF1-201ENST00000258962 C2orf16Q68DN1 1984 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 VCANP13611 3396 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 A0A1W2PQH9 124 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 FAM92AA1XBS5 289 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 APOL1O14791 398 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 RHOP08100 348 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 ADRA1BP35368 520 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 CXCR3P49682 368 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 LMNB2Q03252 620 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 SCAPQ12770 1279 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 VEPH1Q14D04 833 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 GLIS1Q8NBF1 620 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 TSEN2Q8NCE0 465 aaKnown RBP18.05■□□□□ 0.48
SRSF1-201ENST00000258962 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.05■□□□□ 0.48
SRSF1-201ENST00000258962 SPATA17Q96L03 361 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 LIMD1Q9UGP4 676 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 MRPS23Q9Y3D9 190 aaKnown RBP18.05■□□□□ 0.48
SRSF1-201ENST00000258962 ASB3Q9Y575 518 aa18.05■□□□□ 0.48
SRSF1-201ENST00000258962 ZNF197O14709 1029 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 TP73O15350 636 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 F9P00740 461 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 KRT14P02533 472 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 ALADP13716 330 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 GOT1P17174 413 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 ATF6P18850 670 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 TGM2P21980 687 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 AIF1P55008 147 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 TAF12Q16514 161 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 BTBD8Q5XKL5 378 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 C1orf228Q6PIY5 440 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 ITIH5Q86UX2 942 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 KRT222Q8N1A0 295 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 MREGQ8N565 214 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 LEMD2Q8NC56 503 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 FBXO25Q8TCJ0 367 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 TMEM121Q9BTD3 319 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 SMOC2Q9H3U7 446 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 C10orf88Q9H8K7 445 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 GMIPQ9P107 970 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 RCOR3Q9P2K3 495 aaPredicted RBP18.04■□□□□ 0.48
SRSF1-201ENST00000258962 ASIC3Q9UHC3 531 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 ZFP37Q9Y6Q3 630 aaPredicted RBP18.04■□□□□ 0.48
SRSF1-201ENST00000258962 BDP1A6H8Y1 2624 aa18.04■□□□□ 0.48
SRSF1-201ENST00000258962 IRAK2O43187 625 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 GBP1P32455 592 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 PLTPP55058 493 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 EIF3EP60228 445 aaKnown RBP18.03■□□□□ 0.48
SRSF1-201ENST00000258962 SEMA3BQ13214 749 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 MTMR3Q13615 1198 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 DENND5BQ6ZUT9 1274 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 PDZD4Q76G19 769 aaPredicted RBP18.03■□□□□ 0.48
SRSF1-201ENST00000258962 GSTA5Q7RTV2 222 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 MON1AQ86VX9 555 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 RNF139Q8WU17 664 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 ART4Q93070 314 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 MYADMQ96S97 322 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 VIPAS39Q9H9C1 493 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 ASAH2Q9NR71 780 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 WHRNQ9P202 907 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 CDH7Q9ULB5 785 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 DOCK6Q96HP0 2047 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 C5orf42Q9H799 3197 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 MCF2LO15068 1137 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 DCXO43602 365 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 RTN3O95197 1032 aaPredicted RBP18.03■□□□□ 0.48
SRSF1-201ENST00000258962 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 MYL4P12829 197 aa18.03■□□□□ 0.48
SRSF1-201ENST00000258962 ETS1P14921 441 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms