RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 VPS72Q15906 364 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 ZIK1Q3SY52 487 aaPredicted RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 ZACNQ401N2 412 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 FBXL19Q6PCT2 694 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 CDK4P11802 303 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 ITGAXP20702 1163 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 GRK2P25098 689 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 MPSTP25325 297 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 GRIA3P42263 894 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 TAP1Q03518 808 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 EMC2Q15006 297 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 OGFOD2Q6N063 350 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 LZICQ8WZA0 190 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 PBXIP1Q96AQ6 731 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 SEPHS2Q99611 448 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 AP3B1O00203 1094 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 SLC4A1P02730 911 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PIK3R1P27986 724 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 ADORA2BP29275 332 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 NR1D2Q14995 579 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 OR52B2Q96RD2 323 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PKP2Q99959 881 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 DGCR6LQ9BY27 220 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 USP29Q9HBJ7 922 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PLGRKTQ9HBL7 147 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 DNAJA2O60884 412 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 GPD1P21695 349 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 HMOX2P30519 316 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 NRBF2Q96F24 287 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 VPS50Q96JG6 964 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 MAML3Q96JK9 1138 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 CHST12Q9NRB3 414 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PCDHGB4Q9UN71 923 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 AP4E1Q9UPM8 1137 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 PCDHGB5Q9Y5G0 923 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 TFAP2AP05549 437 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 POLBP06746 335 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 BNIP3Q12983 259 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 ANGEL2Q5VTE6 544 aaKnown RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 EGFLAMQ63HQ2 1017 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 CDKL3Q8IVW4 592 aaPredicted RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 VCPIP1Q96JH7 1222 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 GJD4Q96KN9 370 aaPredicted RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
USP30-201ENST00000257548 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 BLOC1S6Q9UL45 172 aa12.63□□□□□ -0.39
USP30-201ENST00000257548 GAKO14976 1311 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 CLOCKO15516 846 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 CHRNGP07510 517 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TGM2P21980 687 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 ATICP31939 592 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 GNA12Q03113 381 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 ITKQ08881 620 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TBCELQ5QJ74 424 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 DDIASQ8IXT1 998 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 CLEC4FQ8N1N0 589 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 SLC35B2Q8TB61 432 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 APBA2Q99767 749 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 C6orf203Q9P0P8 240 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 A0A1B0GTW7 788 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 SDR42E2A6NKP2 422 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TRIM13O60858 407 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 NR3C2P08235 984 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 ZNF23P17027 643 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 IL10P22301 178 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 CCR10P46092 362 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 CPXM1Q96SM3 734 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TIMMDC1Q9NPL8 285 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms