RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CYP3A43Q9HB55 503 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 SOX13Q9UN79 622 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 TRAFD1O14545 582 aaPredicted RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 TRPA1O75762 1119 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 DSG1Q02413 1049 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 BIRC2Q13490 618 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 RWDD4Q6NW29 188 aaKnown RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 SIX6OS1Q8N1H7 587 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 PLD6Q8N2A8 252 aaKnown RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 ZNF483Q8TF39 744 aaPredicted RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 PCDHA11Q9Y5I1 949 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 ADCY6O43306 1168 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 MCF2P10911 925 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 NUDT2P50583 147 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 PDCD2Q16342 344 aaPredicted RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 GALNT4Q8N4A0 578 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 GCNAQ96QF7 691 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 TUBGCP5Q96RT8 1024 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 C20orf96Q9NUD7 363 aaPredicted RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.87□□□□□ -0.19
VHL-201ENST00000256474 SIN3BO75182 1162 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 GABBR2O75899 941 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 RECQL4O94761 1208 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 PSEN1P49768 467 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 MAP3K7CLP57077 242 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 ENPEPQ07075 957 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 ZNF354CQ86Y25 554 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 ASB7Q9H672 318 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 IARS2Q9NSE4 1012 aaKnown RBP13.87□□□□□ -0.19
VHL-201ENST00000256474 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
VHL-201ENST00000256474 TM7SF2O76062 418 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PGM3O95394 542 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 CPA3P15088 417 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PROZP22891 400 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 EPHA3P29320 983 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 GRM1Q13255 1194 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 ZNF460Q14592 562 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 EFHC1Q5JVL4 640 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PRAMEF19Q5SWL8 479 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 ZNF534Q76KX8 674 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PIGZQ86VD9 579 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 ZNF781Q8N8C0 355 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 OMDQ99983 421 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 TASP1Q9H6P5 420 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 RBPJLQ9UBG7 517 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 NME7Q9Y5B8 376 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 CITO14578 2027 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 SMAPO00193 183 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 TSPAN1O60635 241 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 TGDSO95455 350 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 IGFBP6P24592 240 aaPredicted RBP13.86□□□□□ -0.19
VHL-201ENST00000256474 PEX2P28328 305 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 BTKQ06187 659 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 SYPL2Q5VXT5 272 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 FAM219BQ5XKK7 198 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 SH2D5Q6ZV89 423 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 RNF39Q9H2S5 420 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 GPRC5DQ9NZD1 345 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 E7ENQ6 273 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
VHL-201ENST00000256474 ATP6V1B1P15313 513 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 RAG1P15918 1043 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
VHL-201ENST00000256474 TBL3Q12788 808 aaKnown RBP13.86□□□□□ -0.19
VHL-201ENST00000256474 ACAP1Q15027 740 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 PPM1LQ5SGD2 360 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 NCBP2-AS2Q69YL0 99 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 IRGCQ6NXR0 463 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 TMA16Q96EY4 203 aaKnown RBP13.86□□□□□ -0.19
VHL-201ENST00000256474 ZNF778Q96MU6 729 aa13.86□□□□□ -0.19
VHL-201ENST00000256474 CCDC189A1A4V9 331 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 BCLAF3A2AJT9 711 aaKnown RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 A6NHS1 94 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TRDMT1O14717 391 aaKnown RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 DYNC1LI2O43237 492 aaPredicted RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 POLBP06746 335 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 CHRNGP07510 517 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 CRHR1P34998 444 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 KRT72Q14CN4 511 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 HFE2Q6ZVN8 426 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 PLPPR4Q7Z2D5 763 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 RNF139Q8WU17 664 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 FAM136AQ96C01 138 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SNX15Q9NRS6 342 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 NUDT5Q9UKK9 219 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 LOXHD1Q8IVV2 1947 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms