RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RNF157Q96PX1 679 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 MRPL45Q9BRJ2 306 aaKnown RBP19.48■□□□□ 0.71
SNX4-201ENST00000251775 TUT1Q9H6E5 874 aaKnown RBP19.48■□□□□ 0.71
SNX4-201ENST00000251775 CDH22Q9UJ99 828 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 C15orf38-AP3S2A0A0A6YYH1 394 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 HMX2A2RU54 273 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 TXNDC9O14530 226 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 VILLO15195 856 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 PRPSAP2O60256 369 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 STK10O94804 968 aaKnown RBP19.48■□□□□ 0.71
SNX4-201ENST00000251775 CSH1P0DML2 217 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 CSH2P0DML3 217 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 IL4RP24394 825 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 L1CAMP32004 1257 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 CRHR1P34998 444 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 RGS2P41220 211 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 COPAP53621 1224 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 CBLBQ13191 982 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 ITGA9Q13797 1035 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 ARPINQ7Z6K5 226 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 TTC30AQ86WT1 665 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 NDUFAF2Q8N183 169 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 VTA1Q9NP79 307 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 PTTG2Q9NZH5 202 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 ZC3H7BQ9UGR2 993 aaKnown RBP19.48■□□□□ 0.71
SNX4-201ENST00000251775 KIAA1257Q9ULG3 409 aa19.48■□□□□ 0.71
SNX4-201ENST00000251775 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 CASQ2O14958 399 aaPredicted RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 ITM2AO43736 263 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 PROCP04070 461 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 RAG1P15918 1043 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 ARCQ7LC44 396 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 ACOT1Q86TX2 421 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 HIPK4Q8NE63 616 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 PIP4K2CQ8TBX8 421 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 ACTRT2Q8TDY3 377 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 APBB2Q92870 758 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 KHSRPQ92945 711 aaKnown RBP eCLIP19.47■□□□□ 0.712e-7■■■■□ 26
SNX4-201ENST00000251775 BTBD9Q96Q07 612 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 USP29Q9HBJ7 922 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 POMPQ9Y244 141 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 SF3B1O75533 1304 aaKnown RBP eCLIP19.47■□□□□ 0.717e-7■■■■■ 63.1
SNX4-201ENST00000251775 H7C0C1 242 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 HNRNPRO43390 633 aaKnown RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 LYPLA1O75608 230 aaPredicted RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 GABBR2O75899 941 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 GRM5P41594 1212 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 ATP5OP48047 213 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 FOLH1Q04609 750 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 TFDP2Q14188 446 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 PKDCCQ504Y2 493 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 SCYL2Q6P3W7 929 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 OLFML1Q6UWY5 402 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 GPRC5AQ8NFJ5 357 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 EMID1Q96A84 441 aaPredicted RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 NGRNQ9NPE2 291 aaKnown RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 RAB6BQ9NRW1 208 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 FAM49BQ9NUQ9 324 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.47■□□□□ 0.71
SNX4-201ENST00000251775 DNAJC16Q9Y2G8 782 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 MAD1L1Q9Y6D9 718 aa19.47■□□□□ 0.71
SNX4-201ENST00000251775 H3BNX3 289 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 SIN3BO75182 1162 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 KLHL2O95198 593 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 GSRP00390 522 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 KRT81Q14533 505 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 GRIK4Q16099 956 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 FAM47CQ5HY64 1035 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 NT5DC4Q86YG4 428 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 WDR75Q8IWA0 830 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 ADGRF2Q8IZF7 708 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 PLD5Q8N7P1 536 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 PIWIL2Q8TC59 973 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 DNAJC1Q96KC8 554 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 CYP4F11Q9HBI6 524 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 DNAAF2Q9NVR5 837 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 SNX9Q9Y5X1 595 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 TRDMT1O14717 391 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 PEX1O43933 1283 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 KRT38O76015 456 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 SNAI1O95863 264 aaPredicted RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 TFAP2AP05549 437 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 SERPINB6P35237 376 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 IRX4P78413 519 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 TBL3Q12788 808 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 SNAPC2Q13487 334 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 CA9Q16790 459 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 TMC7Q7Z402 723 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 CAND1Q86VP6 1230 aaKnown RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 SCUBE3Q8IX30 993 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 PQLC3Q8N755 202 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.46■□□□□ 0.71
SNX4-201ENST00000251775 SIKE1Q9BRV8 207 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 SHCBP1LQ9BZQ2 653 aa19.46■□□□□ 0.71
SNX4-201ENST00000251775 TMCC1O94876 653 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 MAP3K6O95382 1288 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 FAM200BP0CF97 657 aa19.45■□□□□ 0.7
SNX4-201ENST00000251775 TLR1Q15399 786 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms