RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 FGFBP2Q9BYJ0 223 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 NMRK2Q9NPI5 230 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 RBM22Q9NW64 420 aaKnown RBP eCLIP20.29■□□□□ 0.84
SOX4-201ENST00000244745 SPASTQ9UBP0 616 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 TIMM13Q9Y5L4 95 aaPredicted RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 COMMD3-BMI1R4GMX3 469 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ZDHHC17Q8IUH5 632 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 TBL1YQ9BQ87 522 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 IMPAD1Q9NX62 359 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 CNTNAP2Q9UHC6 1331 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 WFS1O76024 890 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 ABHD2P08910 425 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 FGFR3P22607 806 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 FUT2Q10981 343 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 FBXO32Q969P5 355 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 MARK4Q96L34 752 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 COQ7Q99807 217 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 ZMYM2Q9UBW7 1377 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 THPOP40225 353 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 ALDH1A3P47895 512 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 GTF2BQ00403 316 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 BNIPLQ7Z465 357 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 PLEKHA8Q96JA3 519 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 NOL6Q9H6R4 1146 aaKnown RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 NRDE2Q9H7Z3 1164 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 TSC22D2O75157 780 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 RASSF9O75901 435 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 PARNO95453 639 aaKnown RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 SLC11A2P49281 568 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 PDK4Q16654 411 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 PPP4R4Q6NUP7 873 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 KCNK1O00180 336 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 USP12O75317 370 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 INSRRP14616 1297 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 ME2P23368 584 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 RPL22P35268 128 aaKnown RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 ABCG1P45844 678 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 LHX1P48742 406 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 NPY2RP49146 381 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 DRG2P55039 364 aaKnown RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 MYO1HQ8N1T3 1032 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 NMRAL1Q9HBL8 299 aa20.28■□□□□ 0.84
SOX4-201ENST00000244745 DMAP1Q9NPF5 467 aaPredicted RBP20.28■□□□□ 0.84
SOX4-201ENST00000244745 CASTOR2A6NHX0 329 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 HACD1B0YJ81 288 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 DDX3YO15523 660 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 CETPP11597 493 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 MRPS22P82650 360 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 UBAP2LQ14157 1087 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 DEFB106AQ8N104 65 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 LRMDAQ9H2I8 198 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 PNMA8BQ9ULN7 279 aaPredicted RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 MRASO14807 208 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 PHGDHO43175 533 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 PGM3O95394 542 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 SLC26A2P50443 739 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 RHBDL3P58872 404 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 CDH18Q13634 790 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 FIG4Q92562 907 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 ATAD3AQ9NVI7 634 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 ENDOD1O94919 500 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 CPSF4O95639 269 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 ETS2P15036 469 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 CRABP2P29373 138 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 OXCT1P55809 520 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 CSTF3Q12996 717 aaKnown RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 LENG1Q96BZ8 264 aaPredicted RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 FAM163AQ96GL9 167 aaPredicted RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 TMEM245Q9H330 911 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 CCDC167Q9P0B6 97 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 H2AFY2Q9P0M6 372 aaPredicted RBP20.27■□□□□ 0.84
SOX4-201ENST00000244745 TOMM70O94826 608 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 NAB1Q13506 487 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 TTLL9Q3SXZ7 439 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 MTERF3Q96E29 417 aa20.27■□□□□ 0.84
SOX4-201ENST00000244745 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 PDZK1P1A8MUH7 402 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 SHOX2O60902 331 aaPredicted RBP20.27■□□□□ 0.83
SOX4-201ENST00000244745 ZMPSTE24O75844 475 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 CRTAMO95727 393 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 GLRA2P23416 452 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 PRIM2P49643 509 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 ACAP1Q15027 740 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 RSBN1Q5VWQ0 802 aaPredicted RBP20.27■□□□□ 0.83
SOX4-201ENST00000244745 ZPBP2Q6X784 338 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 C11orf96Q7Z7L8 435 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 COPG2Q9UBF2 871 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 PCDHB7Q9Y5E2 793 aa20.27■□□□□ 0.83
SOX4-201ENST00000244745 FAM95CA0A1B0GW59 222 aa20.26■□□□□ 0.83
SOX4-201ENST00000244745 VAPBO95292 243 aa20.26■□□□□ 0.83
SOX4-201ENST00000244745 GSNP06396 782 aa20.26■□□□□ 0.83
SOX4-201ENST00000244745 CCNHP51946 323 aaPredicted RBP20.26■□□□□ 0.83
SOX4-201ENST00000244745 ST8SIA6P61647 398 aa20.26■□□□□ 0.83
SOX4-201ENST00000244745 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms