RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 APOL2Q9BQE5 337 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ARHGEF9O43307 516 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ITIH2P19823 946 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 POLD3Q15054 466 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PAPD7Q5XG87 772 aaKnown RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 AGMOQ6ZNB7 445 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ACAD11Q709F0 780 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 MMGT1Q8N4V1 131 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 SLC26A7Q8TE54 656 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 FIZ1Q96SL8 496 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ISCUQ9H1K1 167 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ZFATQ9P243 1243 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 HMGXB4Q9UGU5 601 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PLA2G4CQ9UP65 541 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 MBLAC1A4D2B0 266 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PRR23AA6NEV1 266 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 KDM1AO60341 852 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SOAT2O75908 522 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 CARSP49589 748 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ACAP1Q15027 740 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SYDE1Q6ZW31 735 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 LONP2Q86WA8 852 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ATP6V1E2Q96A05 226 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ING2Q9H160 280 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 LHX5Q9H2C1 402 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 RBM22Q9NW64 420 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 UBP1Q9NZI7 540 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 NAALADL1Q9UQQ1 740 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PCDHA3Q9Y5H8 950 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 FLT3P36888 993 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 MATKP42679 507 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 RAP1GAP2Q684P5 730 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 C16orf59Q7L2K0 433 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 APTXQ7Z2E3 356 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ZNF280BQ86YH2 543 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 NUDCD3Q8IVD9 361 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 MAB21L3Q8N8X9 362 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 BADQ92934 168 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 WWP1Q9H0M0 922 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 CD248Q9HCU0 757 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ZC3H7BQ9UGR2 993 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 STYXL1Q9Y6J8 313 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 POLR2AP24928 1970 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 KCNE1P15382 129 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 HOXA11P31270 313 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PSEN1P49768 467 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SLC5A3P53794 718 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 EXT2Q93063 718 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 VPS11Q9H270 941 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PDLIM7Q9NR12 457 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 CNTN3Q9P232 1028 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ZNF831Q5JPB2 1677 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 MDM4O15151 490 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ERBB2P04626 1255 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 PRLRP16471 622 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 FNTAP49354 379 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SCNN1BP51168 640 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ITGA8P53708 1063 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 COPS2P61201 443 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SMARCB1Q12824 385 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 HIC1Q14526 733 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SMG7Q92540 1137 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 TWNKQ96RR1 684 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 C11orf84Q9BUA3 381 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 ERVK-5Q9HDB9 667 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 NT5MQ9NPB1 228 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SIX2Q9NPC8 291 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SAE1Q9UBE0 346 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SIX4Q9UIU6 781 aa9.66□□□□□ -0.86
CCDC113-201ENST00000219299 AJAP1Q9UKB5 411 aaPredicted RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 SMG5Q9UPR3 1016 aaKnown RBP9.66□□□□□ -0.86
CCDC113-201ENST00000219299 TRAV19A0A0A6YYK7 116 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 AP3B1O00203 1094 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 ADAMTS4O75173 837 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 CYP1A2P05177 515 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 KCNA4P22459 653 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 SLC11A1P49279 550 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 DNAL1Q4LDG9 190 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 KDM7AQ6ZMT4 941 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 DENND1CQ8IV53 801 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 SNRNP25Q9BV90 132 aaKnown RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 PALMDQ9NP74 551 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 TBC1D23Q9NUY8 699 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 THG1LQ9NWX6 298 aaKnown RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 PCDHGC5Q9Y5F6 944 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 KNL1Q8NG31 2342 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 PTPRJQ12913 1337 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 A0A1B0GUL6 1792 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 RNF103-CHMP3A0A140T963 221 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 TRDMT1O14717 391 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms