RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 NDRG2Q9UN36 371 aaKnown RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 GREB1Q4ZG55 1949 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 OR6C75A6NL08 312 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 TULP2O00295 520 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 HCRTO43612 131 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 ATP2C2O75185 946 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 ZNF189O75820 626 aaPredicted RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 OAZ2O95190 189 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 RETP07949 1114 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 ZFXP17010 805 aaPredicted RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 NOS2P35228 1153 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 CDKN2BP42772 138 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 TKTL1P51854 596 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 AIF1P55008 147 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 MAP3K7CLP57077 242 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 YWHAZP63104 245 aaKnown RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 RAB33AQ14088 237 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 TAZQ16635 292 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 SPDYCQ5MJ68 293 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 ALS2CLQ60I27 953 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 FAM172AQ8WUF8 416 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 FAM149B1Q96BN6 582 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.383e-8■□□□□ 9.4
SNU13-201ENST00000215956 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 IER2Q9BTL4 223 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 POPDC2Q9HBU9 364 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 DRG1Q9Y295 367 aaKnown RBP12.68□□□□□ -0.38
SNU13-201ENST00000215956 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 CEP295Q9C0D2 2601 aa12.68□□□□□ -0.38
SNU13-201ENST00000215956 SDK1Q7Z5N4 2213 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 MYBPHLA2RUH7 354 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 H7C4K7 107 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 PIK3R2O00459 728 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CLDN5O00501 218 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 MAN2B1O00754 1011 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 RHOP08100 348 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 OR1D2P34982 312 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 ATRXP46100 2492 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CCR3P51677 355 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 PTK6Q13882 451 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 RAB41Q5JT25 222 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 KAZNQ674X7 775 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 TANGO2Q6ICL3 276 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CD300LGQ6UXG3 332 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 RTL10Q7L3V2 364 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CENPIQ92674 756 aaPredicted RBP12.67□□□□□ -0.38
SNU13-201ENST00000215956 ELSPBP1Q96BH3 223 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CFAP57Q96MR6 1250 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 HEMGNQ9BXL5 484 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 MED4Q9NPJ6 270 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 WHRNQ9P202 907 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 PCSK1NQ9UHG2 260 aa12.67□□□□□ -0.38
SNU13-201ENST00000215956 CAPN9O14815 690 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 DAPK3O43293 454 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 GRAP2O75791 330 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 F9P00740 461 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 CEBPBP17676 345 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 ITIH2P19823 946 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 ZNF135P52742 658 aaPredicted RBP12.66□□□□□ -0.38
SNU13-201ENST00000215956 CDH6P55285 790 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 MRPS25P82663 173 aaKnown RBP12.66□□□□□ -0.38
SNU13-201ENST00000215956 ATP11AP98196 1134 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 CDO1Q16878 200 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 POTEHQ6S545 545 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 ARFGAP1Q8N6T3 406 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 HSPH1Q92598 858 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 SLC2A13Q96QE2 648 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 FMO2Q99518 471 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 SMOQ99835 787 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 ZNF670Q9BS34 389 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 FOXP3Q9BZS1 431 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 BRD9Q9H8M2 597 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 FAM53CQ9NYF3 392 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
SNU13-201ENST00000215956 MTRRQ9UBK8 725 aa12.66□□□□□ -0.38
SNU13-201ENST00000215956 CDY1Q9Y6F8 540 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms