RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 FDXACB1Q9BRP7 624 aaPredicted RBP14.43□□□□□ -0.1
USH1C-201ENST00000005226 SYBUQ9NX95 663 aa14.43□□□□□ -0.1
USH1C-201ENST00000005226 MTMR10Q9NXD2 777 aa14.43□□□□□ -0.1
USH1C-201ENST00000005226 DTLQ9NZJ0 730 aa14.43□□□□□ -0.1
USH1C-201ENST00000005226 EVPLQ92817 2033 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 DGKIO75912 1065 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 LCP1P13796 627 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 SERPINB5P36952 375 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 ABCE1P61221 599 aaKnown RBP14.42□□□□□ -0.1
USH1C-201ENST00000005226 HNRNPDQ14103 355 aaKnown RBP14.42□□□□□ -0.1
USH1C-201ENST00000005226 PPM1LQ5SGD2 360 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 ARMC3Q5W041 872 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 AAGABQ6PD74 315 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 ST13P4Q8IZP2 240 aaPredicted RBP14.42□□□□□ -0.1
USH1C-201ENST00000005226 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 RAB3IL1Q8TBN0 382 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 ARNTL2Q8WYA1 636 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 NT5C1AQ9BXI3 368 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 C2orf40Q9H1Z8 148 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 COG4Q9H9E3 785 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 HESX1Q9UBX0 185 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 IGKV6-21A0A0C4DH24 114 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 H3BNX3 289 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 NEMP1O14524 444 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 AIM2O14862 343 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 IL18RAPO95256 599 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 NIPAL4Q0D2K0 466 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 LAMB3Q13751 1172 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 GK3PQ14409 553 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 PDK3Q15120 406 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 SOWAHAQ2M3V2 549 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 EML3Q32P44 896 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 CSPG4P5Q96PW8 444 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 OR52B2Q96RD2 323 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 WDR55Q9H6Y2 383 aaPredicted RBP14.42□□□□□ -0.1
USH1C-201ENST00000005226 COPG2Q9UBF2 871 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 AP4E1Q9UPM8 1137 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 TNFSF13BQ9Y275 285 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 INPP5FQ9Y2H2 1132 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 HES2Q9Y543 173 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 AK5Q9Y6K8 562 aa14.42□□□□□ -0.1
USH1C-201ENST00000005226 ANK1P16157 1881 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 GLRA3O75311 464 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 TPSB2P20231 275 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 IRF9Q00978 393 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 FOLH1Q04609 750 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 CDK18Q07002 472 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 TPSAB1Q15661 275 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
USH1C-201ENST00000005226 FAM131BQ86XD5 332 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 ACVR1CQ8NER5 493 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 ACTRT2Q8TDY3 377 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 AGAP3Q96P47 875 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 NDNQ99608 321 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 CENPKQ9BS16 269 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 DPEP3Q9H4B8 488 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 DPP3Q9NY33 737 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 SNX9Q9Y5X1 595 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 CCDC78A2IDD5 438 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 AMHP03971 560 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 VTNP04004 478 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 COX4I1P13073 169 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 CPA3P15088 417 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 SEMA5AQ13591 1074 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 NCBP2-AS2Q69YL0 99 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 SPNS2Q8IVW8 549 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 FBXW8Q8N3Y1 598 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 HTR3CQ8WXA8 447 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 FCRL3Q96P31 734 aaPredicted RBP14.41□□□□□ -0.1
USH1C-201ENST00000005226 LENG8Q96PV6 779 aaPredicted RBP14.41□□□□□ -0.1
USH1C-201ENST00000005226 AGAP2Q99490 1192 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 ZNF670Q9BS34 389 aa14.41□□□□□ -0.1
USH1C-201ENST00000005226 DMAP1Q9NPF5 467 aaPredicted RBP14.41□□□□□ -0.1
USH1C-201ENST00000005226 SF3B1O75533 1304 aaKnown RBP eCLIP14.4□□□□□ -0.1
USH1C-201ENST00000005226 PDGFRBP09619 1106 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 PSMB4P28070 264 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 ADORA2BP29275 332 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 CCNYQ8ND76 341 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 C12orf42Q96LP6 360 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 PDZD7Q9H5P4 517 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 CYP3A43Q9HB55 503 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 DCDC2Q9UHG0 476 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 GOLGA8TH3BQL2 631 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 CFLARO15519 480 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 PITX1P78337 314 aaPredicted RBP14.4□□□□□ -0.1
USH1C-201ENST00000005226 KLF10Q13118 480 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 TLR1Q15399 786 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 PAOXQ6QHF9 649 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 ADGRG6Q86SQ4 1221 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 FBXO16Q8IX29 292 aaPredicted RBP14.4□□□□□ -0.1
USH1C-201ENST00000005226 DCLK2Q8N568 766 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.4□□□□□ -0.1
USH1C-201ENST00000005226 NAT14Q8WUY8 206 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 ATP2A3Q93084 1043 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 QKIQ96PU8 341 aaKnown RBP eCLIP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms