RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 CtifQ6PEE2 600 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Zhx2Q8C0C0 836 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Exd2Q8VEG4 650 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Pcdhga6Q91XY2 932 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Pmf1Q9CPV5 202 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Tmem192Q9CXT7 266 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Inpp4aQ9EPW0 939 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 SynrgQ5SV85 1306 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Golga4Q91VW5 2238 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 S100zB9EJL3 99 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ugt1a6bK9J7B2 531 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Snap23O09044 210 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Stfa3P35173 103 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 ErfP70459 551 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ugt1a6Q64435 531 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Scaf4Q6PFF0 1209 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ugt1a7cQ6ZQM8 531 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rcn3Q8BH97 328 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rps6kl1Q8R2S1 544 aa9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 AclyQ91V92 1091 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Vps35Q9EQH3 796 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Prrc2bQ7TPM1 1486 aaKnown RBP9.52□□□□□ -0.88
Col6a5-201ENSMUST00000165165 NesQ6P5H2 1864 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 PrkcdP28867 674 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Nos3P70313 1202 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rbp1Q00915 135 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Srbd1Q497V5 1015 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rhox12Q4TU81 186 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 DgkqQ6P5E8 934 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Pik3c3Q6PF93 887 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Zfp317Q8C0Q5 607 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 WwoxQ91WL8 414 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rilpl2Q99LE1 197 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Gtf2ird2Q99NI3 936 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 GarsQ9CZD3 729 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Vmn2r25W4VSP2 855 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Grin2dQ03391 1323 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Lgr4A2ARI4 951 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Cdh16O88338 830 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rab12P35283 243 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Epb41P48193 858 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Pdcd5P56812 126 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 AurkaP97477 395 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 PrlrQ08501 608 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 NpeppsQ11011 920 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Scnn1aQ61180 699 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Pih1d2Q8CHR9 315 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Mterf3Q8R3J4 412 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Mettl16Q9CQG2 553 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Fads2Q9Z0R9 444 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Fkbp9Q9Z247 570 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Znf518aB2RRF6 1478 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 FancaQ9JL70 1439 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ndufaf6A2AIL4 333 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Hbb-bh2B2RVB7 147 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Reps1O54916 795 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 HmbsP22907 361 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Drg1P32233 367 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ddx3xQ62167 662 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Klra3Q64329 266 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ugt2a2Q6PDD0 528 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ssxb10Q6XAR7 170 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Dcaf5Q80T85 946 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ldlrap1Q8C142 308 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Bhlhe22Q8C6A8 355 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Mboat7Q8CHK3 473 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Gpsm2Q8VDU0 679 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Pcdha3Q91Y16 942 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 PnkpQ9JLV6 522 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Hecw1Q8K4P8 1604 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rpl9-ps6A0A140T8T4 192 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Gm13088A2AGW6 460 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 CercamA3KGW5 592 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Eef2kO08796 724 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rb1P13405 921 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Camk2bP28652 542 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Rpl9P51410 192 aaKnown RBP9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 PamP97467 979 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Nfe2Q07279 373 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Tgoln2Q62314 363 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Scara3Q8C850 606 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Gprc6aQ8K4Z6 928 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Tmem82Q8R115 356 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Alg9Q8VDI9 611 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Vangl2Q91ZD4 521 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Sertad1Q9JL10 236 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Bmp15Q9Z0L4 392 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Anxa4P97429 319 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Slc2a13Q3UHK1 637 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Foxn3Q499D0 457 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Zswim9Q6DI92 447 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Inpp4bQ6P1Y8 924 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Zbtb24Q80X44 710 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Sun2Q8BJS4 731 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 SucoQ8C341 1250 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Ift80Q8K057 777 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Nphs2Q91X05 385 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Pcdhgc5Q91XW9 944 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Clcn2Q9R0A1 908 aa9.52□□□□□ -0.89
Col6a5-201ENSMUST00000165165 Hebp1Q9R257 190 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms