RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Tti1Q91V83 1085 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 PlvapQ91VC4 438 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Akr1a1Q9JII6 325 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Adamts5Q9R001 930 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Map3k6Q9WTR2 1291 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Phf2Q9WTU0 1096 aa21.85■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rpl9-ps6A0A140T8T4 192 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ercc2O08811 760 aaKnown RBP21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Zfy1P10925 782 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 SrgnP13609 152 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rpl9P51410 192 aaKnown RBP21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Npas2P97460 816 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Wbp2P97765 261 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Krt80Q0VBK2 452 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Defb25Q30KN8 71 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Itga1Q3V3R4 1179 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Aldh1a2Q62148 518 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Wdr44Q6NVE8 915 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Efcab14Q8BGQ6 484 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Prc1Q99K43 603 aaKnown RBP21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Tacc3Q9JJ11 631 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 QkiQ9QYS9 341 aaKnown RBP21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Slc2a5Q9WV38 501 aa21.84■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Vwa8Q8CC88 1905 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Rhox3fA2ANE1 215 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Mmrn1B2RPV6 1210 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Ppp1r36D3Z0R2 411 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gm5415E9PXF3 478 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Atf6F6VAN0 656 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Grip2G3XA20 1042 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Cdo1P60334 200 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Timm13P62075 95 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 AxlQ00993 888 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Sdr16c6Q05A13 316 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 H2-Q2Q4KN81 360 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Nr2c1Q505F1 590 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Gm14685Q52KH6 695 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 ScapQ6GQT6 1276 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Vmn2r26Q6TAC4 855 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Slc38a9Q8BGD6 560 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Oser1Q9D722 291 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Tmco5aQ9D9D5 303 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 IkbkeQ9R0T8 717 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Stau1Q9Z108 487 aaKnown RBP21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Myo7aP97479 2215 aa21.83■■□□□ 1.09
Ccdc88a-202ENSMUST00000109477 Irs2P81122 1321 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Zfp472B0V2W5 534 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Olfm3P63056 478 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 PrlrQ08501 608 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Mcm9Q2KHI9 1134 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Znf746Q3U133 652 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 KrtdapQ3V2T4 102 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 OcrlQ6NVF0 900 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rnf187Q8BFX1 236 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Trpa1Q8BLA8 1125 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Gpr20Q8BYC4 358 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 PvrQ8K094 408 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Arhgap18Q8K0Q5 663 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Spats2Q8K1N4 545 aaKnown RBP21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cog2Q921L5 731 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cybrd1Q925G2 290 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 PgcQ9D7R7 392 aa21.83■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rp1P56716 2095 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Zscan5bB2RTN3 468 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Serpina3iD3Z450 408 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Man2b1O09159 1013 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Shoc2O88520 582 aaKnown RBP21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ppp3ccP48455 513 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Pon1P52430 355 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Sycp3P70281 254 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Fbxw2Q60584 422 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Nfe2l2Q60795 597 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cacna2d2Q6PHS9 1154 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Q810S2 196 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rpl34Q9D1R9 117 aaKnown RBP21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Iqcf1Q9D9K8 182 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Grb14Q9JLM9 538 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 MgamB5THE2 1827 aa21.82■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Siah3B2RWG3 268 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Vmn2r67K7N6T2 851 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Eno1P17182 434 aaKnown RBP21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ptger1P35375 405 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Opa1P58281 960 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 AcrbpQ3V140 540 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Shroom1Q5SX79 823 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Kpna1Q60960 538 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Pdk1Q8BFP9 434 aaKnown RBP21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Eif2aQ8BJW6 581 aaKnown RBP21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Phactr3Q8BYK5 558 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cox18Q8VC74 331 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Pcdha1Q91Y21 948 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Lpin1Q91ZP3 924 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dnajc14Q921R4 703 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cpxm2Q9D2L5 764 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Tsga13Q9DA17 273 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dgcr8Q9EQM6 773 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Kifc1Q9QWT9 674 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cbx8Q9QXV1 362 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Mtmr7Q9Z2C9 660 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Mbd1Q9Z2E2 636 aa21.81■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms