RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Igkv6-29A0A0G2JEI6 115 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Gm5737A0A140LI11 423 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Serpina3jD3Z451 420 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Csf2rb2P26954 878 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 CremP27699 357 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 ThraP63058 492 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Fam89aQ14BJ1 175 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 CrxosQ3UL53 246 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Rap1gap2Q5SVL6 712 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 CtcfQ61164 736 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Slc9a1Q61165 820 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Sh3rf1Q69ZI1 892 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 DgkbQ6NS52 802 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Acnat2Q8BGG9 420 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nsun3Q8CCT7 348 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ago2Q8CJG0 860 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Evc2Q8K1G2 1220 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Timd2Q8R183 305 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ssx2ipQ8VC66 615 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Epn3Q91W69 636 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Dnajc19Q9CQV7 116 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Nudt17Q9CWD3 296 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Castor1Q9CWQ8 331 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 DnlzQ9D113 177 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Cdc20Q9JJ66 499 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Caln1Q9JJG7 219 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Elovl2Q9JLJ4 292 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Eif3iQ9QZD9 325 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Tjp2Q9Z0U1 1167 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Kcnd3Q9Z0V1 655 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ank2Q8C8R3 3898 aa8.28□□□□□ -1.08
Scn8a-202ENSMUST00000096198 Ccdc9bA3KGF9 545 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Zfand4D3Z3C6 739 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Gm10800D3Z496 220 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Srp54bE9PXC0 504 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Pdzd7E9Q9W7 1021 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Slc39a2G3X943 309 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Vmn2r78K7N6U5 853 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ccng2O08918 344 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Dnmt3bO88509 859 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 IapP03975 557 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Lmo2P25801 158 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 ApodP51910 189 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 CgnP59242 1191 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ccl21aP84444 133 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ccl21bP86792 133 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ccl21cP86793 133 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Fahd2Q3TC72 313 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 MyrfQ3UR85 1138 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Hspb6Q5EBG6 162 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Fzd3Q61086 666 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ccdc66Q6NS45 935 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Olfr698Q7TRN4 311 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Slitrk1Q810C1 696 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Kazald1Q8BJ66 313 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Fbxo38Q8BMI0 1194 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Asb14Q8C6Y6 587 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Acot11Q8VHQ9 594 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Pcdha2Q91Y17 948 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ucn3Q924A4 164 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Clcc1Q99LI2 539 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Fbxo32Q9CPU7 355 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Dlgap1Q9D415 992 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Scamp5Q9JKD3 235 aa8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 MylkQ6PDN3 1941 aaKnown RBP8.27□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Tenm3Q9WTS6 2715 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Gm14781A2A9Q9 366 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Pnldc1B2RXZ1 531 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Vmn2r14E9Q759 848 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Vmn2r100E9QAZ9 850 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Farp1F8VPU2 1048 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 SftpcP21841 193 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Gjb3P28231 270 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Cdc25aP48964 514 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Inf2Q0GNC1 1273 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Mageb5Q14AN0 366 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Nek10Q3UGM2 1111 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Nt5c2Q3V1L4 560 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ubash3aQ3V3E1 624 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Nr1h2Q60644 446 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Stard3Q61542 446 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Cyp3a16Q64481 504 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Vsig8Q6P3A4 417 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Atp1a2Q6PIE5 1020 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 ChfrQ810L3 664 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Gm5622Q810Q0 167 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Prkag3Q8BGM7 489 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Hs3st3a1Q8BKN6 393 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 ArsjQ8BM89 598 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Unc45bQ8CGY6 931 aaKnown RBP8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Pop1Q8K205 1045 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Cdca3Q99M54 266 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Msantd3Q9CR78 275 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Galnt15Q9D2N8 638 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 MlklQ9D2Y4 472 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 SgshQ9EQ08 502 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 CtsrQ9JIA9 334 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Cnga3Q9JJZ8 631 aa8.26□□□□□ -1.09
Scn8a-202ENSMUST00000096198 Ror1Q9Z139 937 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms