RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Marveld2Q3UZP0 555 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Znf583Q3V080 568 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 JrkQ60976 557 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Armc12Q80X86 340 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Rsl1d1Q8BVY0 452 aaKnown RBP10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gprc6aQ8K4Z6 928 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 IlkapQ8R0F6 392 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Adgre4Q91ZE5 689 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Grhl1Q921D9 618 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tcaf2Q921K8 919 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gtf2ird2Q99NI3 936 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Klhl28Q9CR40 571 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Cpxm2Q9D2L5 764 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Efcab1Q9D3N2 212 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 PignQ9R1S3 931 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tmem115Q9WUH1 350 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Krt6bQ9Z331 562 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 CrnnD3YUU6 520 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gm8444F6XS56 118 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Vmn2r46L7N282 809 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tuba1bP05213 451 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 RarbP22605 482 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Dsc2P55292 902 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 GuloP58710 440 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tuba1aP68369 451 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gcnt3Q5JCT0 437 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Acot5Q6Q2Z6 421 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Elac2Q80Y81 831 aaKnown RBP10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Fbxo9Q8BK06 437 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Phka2Q8BWJ3 1235 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Coq9Q8K1Z0 313 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Eif3lQ8QZY1 564 aaKnown RBP10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Upb1Q8VC97 393 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Ppp1r16bQ8VHQ3 568 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Slc35a5Q921R7 437 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Ifi44lQ9BDB7 447 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Mxra8Q9DBV4 442 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 LactbQ9EP89 551 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gyg1Q9R062 333 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Epb41l1Q9Z2H5 879 aa10.47□□□□□ -0.73
Lig4-201ENSMUST00000095476 Cyp2a22B2RXZ2 492 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Banf1O54962 89 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Slc16a2O70324 545 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tgm2P21981 686 aaKnown RBP10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Nedd1P33215 660 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Psmc6P62334 389 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Cd36Q08857 472 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Brip1Q5SXJ3 1174 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Slc9c1Q6UJY2 1175 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Kcng4Q80XM3 506 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Eif4bQ8BGD9 611 aaKnown RBP10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Dyrk4Q8BI55 632 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Arhgef33Q8BW86 850 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Elmo3Q8BYZ7 720 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Uba3Q8C878 462 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Fam49bQ921M7 324 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 PrkxQ922R0 355 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Asb4Q9WV71 426 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Gm28363A0A087WQW2 129 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Tex28B1AYN9 409 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Itga4Q00651 1039 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Ipcef1Q5DU31 406 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Armcx2Q6A058 784 aaKnown RBP10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Sgo2Q7TSY8 1164 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Slitrk1Q810C1 696 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Dupd1Q8BK84 215 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Catsper4Q8BVN3 442 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 IntS13Q8QZV7 732 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Fig4Q91WF7 907 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Slc39a3Q99K24 317 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Snrpb2Q9CQI7 225 aaKnown RBP10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Rsph14Q9D3W1 341 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Nxnl2Q9D531 156 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 DmgdhQ9DBT9 869 aa10.46□□□□□ -0.73
Lig4-201ENSMUST00000095476 Abca6Q8K441 1624 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Zfp882E9Q4R4 555 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Gm13128L7MU96 475 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Gm8926L7MUE8 181 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 FaahO08914 579 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Anxa3O35639 323 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Pold2O35654 469 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 GnazO70443 355 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 WapP01173 134 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Phkg1P07934 388 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Fdft1P53798 416 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Slc16a1P53986 493 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Rpl22P67984 128 aaKnown RBP10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Grm2Q14BI2 872 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Psd4Q8BLR5 1005 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Znf428Q8C1M2 176 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Wdr37Q8CBE3 496 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Rwdd4Q9CPR1 188 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Q9CYI0 393 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Tnfaip8l2Q9D8Y7 184 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Pold3Q9EQ28 462 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Pax3P24610 479 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Stfa3P35173 103 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Trpv5P69744 723 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Ppm1jQ149T7 507 aa10.46□□□□□ -0.74
Lig4-201ENSMUST00000095476 Plcl1Q3USB7 1096 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms