RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 2610028H24RikG5E8K1 270 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Akap1O08715 857 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 AmacrO09174 381 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 TxnP10639 105 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 UmpsP13439 481 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Msx3P70354 204 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Cln3Q61124 438 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ptpn14Q62130 1189 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Arl13bQ640N2 427 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Klhl14Q69ZK5 630 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gemin4Q6P6L6 1058 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Sort1Q6PHU5 825 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Akap7Q7TN79 314 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fzd10Q8BKG4 582 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pak5Q8C015 719 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mettl24Q8CCB5 363 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gsto2Q8K2Q2 248 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Snx15Q91WE1 337 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Glra3Q91XP5 464 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Lpin1Q91ZP3 924 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 FdpsQ920E5 353 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ubxn2aQ99KJ0 258 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Vta1Q9CR26 309 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Trpv2Q9WTR1 756 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm10722F6VLK5 217 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr67F8VPJ8 320 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr731F8VQB9 326 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Abhd12bG3UZN6 359 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Soat2O88908 525 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Abce1P61222 599 aaKnown RBP11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Arf4P61750 180 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Atp9bP98195 1146 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Prl3a1Q78Y73 227 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr1057Q7TR75 315 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Clec4b1Q7TS58 209 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Tmem260Q8BMD6 703 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Qsox1Q8BND5 748 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Daam1Q8BPM0 1077 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pcdhb7Q8CDY9 829 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Zdhhc3Q8R173 299 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rnh1Q91VI7 456 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Catsper1Q91ZR5 686 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ctu1Q99J10 420 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mov10l1Q99MV5 1187 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pcyox1Q9CQF9 505 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Spata1Q9D5R4 444 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Doc2gQ9ESN1 387 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Prl2a1Q9JHK0 228 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Akr1c12Q9JLI0 323 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Stap1Q9JM90 297 aaKnown RBP11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ern2Q9Z2E3 911 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Scn1aA2APX8 2009 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 ZxdbA2CE44 873 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Armt1A6H630 439 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Vmn2r72D3Z4N8 856 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 ChrngP04760 519 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 AlbP07724 608 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Hsd11b2P51661 386 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Aqp4P55088 323 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 B3gntl1Q3U129 357 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gpd1lQ3ULJ0 351 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gpr162Q3UN16 588 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Proser1Q5PRE5 913 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gata6Q61169 589 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mbtd1Q6P5G3 631 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ccdc151Q8BSN3 593 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Syne4Q8CII8 388 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Kct2Q8K201 259 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Def8Q99J78 448 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Nmd3Q99L48 503 aaKnown RBP11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rmdn1Q9DCV4 305 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Tmem115Q9WUH1 350 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 GghQ9Z0L8 317 aa11.86□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Tnfrsf14A0A1W2P7D5 276 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3173A6NAS3 172 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Vmn2r87E9PZX4 848 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3020E9Q3J7 150 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Vmn1r39G3UWE6 305 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm17535J3KMR8 224 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fignl2J3QK54 644 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm7694J3QNH8 270 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm2897K7N6T7 172 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Itgb3O54890 787 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Hcn4O70507 1186 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Scg3P47867 471 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 StamP70297 548 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rbm20Q3UQS8 1199 aaKnown RBP11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Btg1-ps1Q3V0S2 161 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Btg1-ps2Q3V0X0 161 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Aldh1a2Q62148 518 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 DstykQ6XUX1 927 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr792Q7TRH9 311 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr533Q7TRT7 320 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mettl21cQ8BLU2 248 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3411Q8C7R2 150 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ssx2ipQ8VC66 615 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Cdc26Q99JP4 85 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Dis3Q9CSH3 958 aaKnown RBP11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Cldn22Q9D7U6 220 aa11.85□□□□□ -0.51
Col9a1-202ENSMUST00000088349 1700123K08RikQ9D991 295 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms