RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Pth2rQ91V95 546 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Dlg2Q91XM9 852 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Nphs1Q9QZS7 1256 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 FscbA1EGX6 1074 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Zyg11aA2BFL2 627 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 4930402K13RikB1AW18 415 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm2956E9PVJ0 216 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm3002E9PW72 216 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm8108K7N734 216 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm3488M0QW81 238 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 RargP18911 458 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Brms1lQ3U1T3 323 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Tnfaip2Q61333 691 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 HiraQ61666 1015 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Cyp3a11Q64459 504 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Trit1Q80UN9 467 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Nrde2Q80XC6 1172 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Lyve1Q8BHC0 318 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 BoraQ8BS90 525 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Crlf2Q8CII9 359 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Taf10Q8K0H5 218 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ears2Q9CXJ1 523 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Mfsd10Q9D2V8 456 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 2010005H15RikQ9D8D6 97 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Rdh14Q9ERI6 334 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 NckipsdQ9ESJ4 714 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Sipa1l3G3X9J0 1776 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ankrd16A2AS55 361 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm13212B1ASQ7 799 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Vmn2r27D3YUK6 857 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Tbx1P70323 479 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ext2P70428 718 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 S100a13P97352 98 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Atg16l2Q6KAU8 623 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Q6PAC4 1279 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Prr18Q6PAN7 307 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Papd7Q6PB75 542 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 SgtaQ8BJU0 315 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Smad3Q8BUN5 425 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ttc23Q8CHY7 488 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 LzicQ8K3C3 190 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Caap1Q8VDY9 356 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Epn3Q91W69 636 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 FtcdQ91XD4 541 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Cog2Q921L5 731 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Sytl2Q99N50 950 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 NinQ61043 2035 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Lzts3A2AHG0 700 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Dcpp2E9PYC2 171 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Top6blJ3QMY9 579 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Dcpp1L7N1X9 171 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Btg3P50615 252 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gabpb1Q00420 383 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Colec11Q3SXB8 272 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Kcna4Q61423 654 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ckap2lQ7TS74 745 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Efcab14Q8BGQ6 484 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Rbm22Q8BHS3 420 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ca12Q8CI85 354 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Spats2lQ91WJ7 558 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 March8Q9DBD2 286 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ppp1r12aQ9DBR7 1029 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Tssc4Q9JHE7 317 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ddx21Q9JIK5 851 aaKnown RBP8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Shcbp1Q9Z179 668 aa8.17□□□□□ -1.1
Lig3-201ENSMUST00000021039 Bpifb9bA2AJD1 591 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Gm4450E9Q007 373 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Hcls1P49710 486 aaKnown RBP8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Wdr18Q4VBE8 431 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Prkaa1Q5EG47 559 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Hsd3b4Q61767 373 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Phf24Q80TL4 400 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Usp8Q80U87 1080 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Bpifb9aQ80XI7 591 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Arhgef33Q8BW86 850 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Lca5lQ8C0X0 741 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Adgrf4Q9D2L6 698 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ppp2r3dQ9Z176 491 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Zfp985A2A7A5 519 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 SpibO35906 267 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Smpdl3aP70158 445 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Irx1P81068 480 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Zyg11bQ3UFS0 744 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Nr1h4Q60641 488 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Lcp1Q61233 627 aaKnown RBP8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Dpysl3Q62188 570 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ttyh3Q6P5F7 524 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Dsg1bQ7TSF1 1060 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Rps6ka5Q8C050 863 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Olfr589Q8VGV8 317 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ergic2Q9CR89 377 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Creld2Q9CYA0 350 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 TfgQ9Z1A1 397 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Arfgef1G3X9K3 1846 aaKnown RBP8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 E2f6O54917 272 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 NrlP54846 237 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 NficP70255 439 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Q3TQQ9 903 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Rcsd1Q3UZA1 412 aa8.16□□□□□ -1.1
Lig3-201ENSMUST00000021039 Ksr1Q61097 873 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms