RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ENGP17813 658 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 OXTRP30559 389 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 MEA1Q16626 185 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 EXOC3L4Q17RC7 722 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 N4BP2L1Q5TBK1 243 aaPredicted RBP18.64■□□□□ 0.57
PNKP-225ENST00000636214 TRIM65Q6PJ69 517 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 METTL3Q86U44 580 aaKnown RBP18.64■□□□□ 0.57
PNKP-225ENST00000636214 TMPRSS6Q8IU80 811 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 MLKLQ8NB16 471 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 HJURPQ8NCD3 748 aaPredicted RBP18.64■□□□□ 0.57
PNKP-225ENST00000636214 DQX1Q8TE96 717 aaKnown RBP18.64■□□□□ 0.57
PNKP-225ENST00000636214 SORCS1Q8WY21 1168 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 CNTNAP3BQ96NU0 1288 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 MED15Q96RN5 788 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 CNTNAP3Q9BZ76 1288 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 SLC32A1Q9H598 525 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 CD248Q9HCU0 757 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 ABCB8Q9NUT2 735 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 ANGPTL2Q9UKU9 493 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 CKAP5Q14008 2032 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 SYPP08247 313 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 SERPINF2P08697 491 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 POLR2EP19388 210 aaKnown RBP18.63■□□□□ 0.57
PNKP-225ENST00000636214 PRKCHP24723 683 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 HLA-FP30511 346 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 GPD2P43304 727 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 NNTQ13423 1086 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 ENPP2Q13822 863 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 ARHGAP44Q17R89 818 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 MPP7Q5T2T1 576 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 PEAR1Q5VY43 1037 aaPredicted RBP18.63■□□□□ 0.57
PNKP-225ENST00000636214 DENND1BQ6P3S1 775 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 RFWD3Q6PCD5 774 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 CACUL1Q86Y37 369 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 MFN1Q8IWA4 741 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 SCUBE3Q8IX30 993 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 STK32AQ8WU08 396 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 ZNF606Q8WXB4 792 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 STIM2Q9P246 746 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 TLR6Q9Y2C9 796 aa18.63■□□□□ 0.57
PNKP-225ENST00000636214 CACNA1EQ15878 2313 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 CDX4O14627 284 aaPredicted RBP18.62■□□□□ 0.57
PNKP-225ENST00000636214 MOCS2O96007 188 aaPredicted RBP18.62■□□□□ 0.57
PNKP-225ENST00000636214 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 ZNF252P-AS1Q0IIN9 211 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 PIK3R6Q5UE93 754 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 SLC41A1Q8IVJ1 513 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 OR2T3Q8NH03 318 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 CYB5D2Q8WUJ1 264 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 AZIN2Q96A70 460 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
PNKP-225ENST00000636214 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 MKRN2Q9H000 416 aaKnown RBP18.62■□□□□ 0.57
PNKP-225ENST00000636214 FBRSQ9HAH7 460 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 USP36Q9P275 1121 aaKnown RBP18.62■□□□□ 0.57
PNKP-225ENST00000636214 APEX2Q9UBZ4 518 aa18.62■□□□□ 0.57
PNKP-225ENST00000636214 GOLGA6L7A0A1B0GV03 622 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 GTPBP10A4D1E9 387 aaKnown RBP18.61■□□□□ 0.57
PNKP-225ENST00000636214 E5RJQ4 531 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 OPHN1O60890 802 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 HLA-EP13747 358 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 CSRP1P21291 193 aaKnown RBP18.61■□□□□ 0.57
PNKP-225ENST00000636214 SNX16P57768 344 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 ST8SIA6P61647 398 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 CDH18Q13634 790 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 PLEKHG6Q3KR16 790 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 MBLAC2Q68D91 279 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.61■□□□□ 0.57
PNKP-225ENST00000636214 ADAM32Q8TC27 787 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 ZNF419Q96HQ0 510 aaPredicted RBP18.61■□□□□ 0.57
PNKP-225ENST00000636214 NUP58Q9BVL2 599 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 GPR174Q9BXC1 333 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 POPDC2Q9HBU9 364 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 CD93Q9NPY3 652 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 ITM2CQ9NQX7 267 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 WSB2Q9NYS7 404 aaPredicted RBP18.61■□□□□ 0.57
PNKP-225ENST00000636214 TJP2Q9UDY2 1190 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 SLC12A6Q9UHW9 1150 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 NAALADL1Q9UQQ1 740 aa18.61■□□□□ 0.57
PNKP-225ENST00000636214 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 GABBR2O75899 941 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 MOCS3O95396 460 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 DLDP09622 509 aaKnown RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 CEACAM1P13688 526 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 SLC9A1P19634 815 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 RPL34P49207 117 aaKnown RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 TPMTP51580 245 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 SGSHP51688 502 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 PTK2Q05397 1052 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 TTC31Q49AM3 519 aaPredicted RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 FAM133BQ5BKY9 247 aaKnown RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 TMEM215Q68D42 235 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 BEND5Q7L4P6 421 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 CARNMT1Q8N4J0 409 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms