RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 HOXC6P09630 235 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SRGAP2CP0DJJ0 459 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 NIPAL4Q0D2K0 466 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SEMA5AQ13591 1074 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SEPT12Q8IYM1 358 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 MPP5Q8N3R9 675 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SREK1Q8WXA9 508 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 VPS33BQ9H267 617 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 PCDH18Q9HCL0 1135 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 VPS28Q9UK41 221 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 AP4B1Q9Y6B7 739 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 H0YIN7 160 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 M0QYV0 167 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 VWA5AO00534 786 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 MSCO60682 206 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 METTL18O95568 372 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 GPD2P43304 727 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 NR1H2P55055 460 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 ADGRE1Q14246 886 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 EPGNQ6UW88 154 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 PHTF2Q8N3S3 785 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 ACO2Q99798 780 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 FAM58BPP0C7Q3 252 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 CPA3P15088 417 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 ZFXP17010 805 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 CREB5Q02930 508 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 SH3PXD2AQ5TCZ1 1133 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 PCDH19Q8TAB3 1148 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 DLG3Q92796 817 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 NAT9Q9BTE0 207 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 CDH19Q9H159 772 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 UBAP1Q9NZ09 502 aa15.22■□□□□ 0.03
CACNA1A-220ENST00000635988 STK10O94804 968 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 MMP10P09238 476 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 VDRP11473 427 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 HSPA1LP34931 641 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 NR2C2P49116 596 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 SETD3Q86TU7 594 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 ZFP28Q8NHY6 868 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 TRIM56Q9BRZ2 755 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 COG4Q9H9E3 785 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 TMEM114B3SHH9 223 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 DPYSL4O14531 572 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 MDM4O15151 490 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 SLC22A2O15244 555 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 NUMBP49757 651 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 DCTN2Q13561 401 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 APOFQ13790 326 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 FLOT2Q14254 428 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 C15orf59Q2T9L4 293 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 VWA5B1Q5TIE3 1220 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 OR6B2Q6IFH4 312 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 SCYL2Q6P3W7 929 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 TICAM1Q8IUC6 712 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 METTL25Q8N6Q8 603 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 KYQ8NBH2 561 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 GRIP2Q9C0E4 1043 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 CYP3A43Q9HB55 503 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 RIPK3Q9Y572 518 aa15.21■□□□□ 0.03
CACNA1A-220ENST00000635988 H2AFYO75367 372 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 KRT19P08727 400 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 TYK2P29597 1187 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CDO1Q16878 200 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 MYLK3Q32MK0 819 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CASC4Q6P4E1 433 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 BNC2Q6ZN30 1099 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 ZBTB8OSQ8IWT0 167 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CNDP1Q96KN2 507 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 KIAA1217Q5T5P2 1943 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 RGSL1A5PLK6 1076 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 GPR25O00155 361 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 ZBTB14O43829 449 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CILPO75339 1184 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 HSPA4LO95757 839 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 PGAM1P18669 254 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CDH8P55286 799 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 PRKG1Q13976 671 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 TARBP2Q15633 366 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 EFCAB3Q8N7B9 438 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CNBD2Q96M20 576 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 HAUS8Q9BT25 410 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 SENP6Q9GZR1 1112 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 TMEM216Q9P0N5 145 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms