RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ZFAND2BQ8WV99 257 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 FAM136AQ96C01 138 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TRAPPC9Q96Q05 1148 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 MIPEPQ99797 713 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TMEM121Q9BTD3 319 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 DNAJB4Q9UDY4 337 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCF11-207ENST00000624931 M0QYV0 167 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 PSMG1O95456 288 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 VDRP11473 427 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 RAP1GDS1P52306 607 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 PSMC1P62191 440 aaKnown RBP18.19■□□□□ 0.5
PCF11-207ENST00000624931 ACAP1Q15027 740 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 GOLGA7BQ2TAP0 167 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 KHDC1Q4VXA5 237 aaKnown RBP18.19■□□□□ 0.5
PCF11-207ENST00000624931 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 LGSNQ5TDP6 509 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 C6orf163Q5TEZ5 329 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 SNX30Q5VWJ9 437 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 SLC30A9Q6PML9 568 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCF11-207ENST00000624931 NECAB2Q7Z6G3 386 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 ANKMY2Q8IV38 441 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 FBXO36Q8NEA4 188 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 RFWD2Q8NHY2 731 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 UBA3Q8TBC4 463 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 RAB3IL1Q8TBN0 382 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 MCEEQ96PE7 176 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 SNX25Q9H3E2 840 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 PNPLA8Q9NP80 782 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 NMRK1Q9NWW6 199 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 WDR35Q9P2L0 1181 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 KANSL3Q9P2N6 904 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 ASB3Q9Y575 518 aa18.19■□□□□ 0.5
PCF11-207ENST00000624931 CFAP69A5D8W1 941 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 SIGLEC16A6NMB1 481 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 B3GAT3O94766 335 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 CCDC130P13994 396 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 EN2P19622 333 aaPredicted RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 STIP1P31948 543 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 SARNPP82979 210 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 ZNF252P-AS1Q0IIN9 211 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 KPNB1Q14974 876 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 RBBP5Q15291 538 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 PPP1R26Q5T8A7 1209 aaPredicted RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 TMEM154Q6P9G4 183 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 TOP6BLQ8N6T0 577 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 CCDC110Q8TBZ0 833 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 URGCPQ8TCY9 931 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 SLC44A1Q8WWI5 657 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 YIPF3Q9GZM5 350 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 ARL8BQ9NVJ2 186 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 KCNK4Q9NYG8 393 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 PCDHB7Q9Y5E2 793 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 TTC3P53804 2025 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 A0A0G2JND7 137 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 C3orf70A6NLC5 250 aaPredicted RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 F8VP50 259 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 MAP3K7O43318 606 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 MED7O43513 233 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 SSTR1P30872 391 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 RPL22P35268 128 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 GNL1P36915 607 aaPredicted RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 ETV4P43268 484 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 OTUD4Q01804 1114 aaKnown RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 RCN1Q15293 331 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 CYP4A22Q5TCH4 519 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 KIAA0319Q5VV43 1072 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 LRRC74BQ6ZQY2 392 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 TMPRSS6Q8IU80 811 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 TTC39CQ8N584 583 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 NR1H4Q96RI1 486 aaPredicted RBP18.18■□□□□ 0.5
PCF11-207ENST00000624931 TMEM120AQ9BXJ8 343 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 FAM192AQ9GZU8 254 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 KLHL11Q9NVR0 708 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 DCTN4Q9UJW0 460 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 TSPAN16Q9UKR8 245 aa18.18■□□□□ 0.5
PCF11-207ENST00000624931 H0Y3Z8 333 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 SMIM24O75264 130 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 INHBAP08476 426 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 DLDP09622 509 aaKnown RBP18.17■□□□□ 0.5
PCF11-207ENST00000624931 DSC1Q08554 894 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 PTPN20Q4JDL3 420 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 HP1BP3Q5SSJ5 553 aaPredicted RBP18.17■□□□□ 0.5
PCF11-207ENST00000624931 FNBP1LQ5T0N5 605 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 CAPN12Q6ZSI9 719 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 UNC93AQ86WB7 457 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 COLGALT2Q8IYK4 626 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 ACTL9Q8TC94 416 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 C7orf26Q96N11 449 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 CASD1Q96PB1 797 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 PDP2Q9P2J9 529 aa18.17■□□□□ 0.5
PCF11-207ENST00000624931 ZNF180Q9UJW8 692 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms