RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 PIGSQ96S52 555 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ALG13Q9NP73 1137 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 DNM1LO00429 736 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ERP29P30040 261 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ADSSP30520 456 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 EIF6P56537 245 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 PCID2Q5JVF3 399 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CYB5R4Q7L1T6 521 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 EMC1Q8N766 993 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SERPINB12Q96P63 405 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 MRPL9Q9BYD2 267 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CHRNGP07510 517 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 VDRP11473 427 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 GPC3P51654 580 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 HIRAP54198 1017 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RBM44Q6ZP01 1051 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CMTR1Q8N1G2 835 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF614Q8N883 585 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ERP44Q9BS26 406 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RNF38Q9H0F5 515 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 URB1O60287 2271 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ZSCAN5CA6NGD5 496 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RLN1P04808 185 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 MCL1Q07820 350 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 COTL1Q14019 142 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TCTEX1D2Q8WW35 142 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ZKSCAN4Q969J2 545 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ZSCAN5AQ9BUG6 496 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 EPB41L4BQ9H329 900 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 GPAMQ9HCL2 828 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ADAMTS1Q9UHI8 967 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 I3L521 148 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 NPEPPSP55786 919 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CDKL4Q5MAI5 379 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TERB2Q8NHR7 220 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 STOML3Q8TAV4 291 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SLC9A8Q9Y2E8 581 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 IFRD1O00458 451 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 MAPK1P28482 360 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CAV3P56539 151 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 OGFRL1Q5TC84 451 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SYDE2Q5VT97 1194 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 COL23A1Q86Y22 540 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CAMKK1Q8N5S9 505 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 PHF2O75151 1096 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 NFICP08651 508 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 FGFR4P22455 802 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 IZUMO3Q5VZ72 239 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TTC23LQ6PF05 361 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 LRRC31Q6UY01 552 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 HAUS6Q7Z4H7 955 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SMYD4Q8IYR2 804 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TMEM47Q9BQJ4 181 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TUBAL3A6NHL2 446 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 H3BNX3 289 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 NR3C1P04150 777 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 GTF2H3Q13889 308 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ACOT12Q8WYK0 555 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SQORQ9Y6N5 450 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 TRIM38O00635 465 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 TSPAN1O60635 241 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 IFNA10P01566 189 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 IFNA4P05014 189 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CEP170P1Q96L14 293 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ADGRA2Q96PE1 1338 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PSMD3O43242 534 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 IFI30P13284 250 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 RRM1P23921 792 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PTPN4P29074 926 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CCND2P30279 289 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 EIF5AL1Q6IS14 154 aaKnown RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 INO80EQ8NBZ0 244 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 FAR1Q8WVX9 515 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PIK3R3Q92569 461 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PIGKQ92643 395 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 SLC4A9Q96Q91 983 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 HAO1Q9UJM8 370 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 ASXL3Q9C0F0 2248 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 C6orf183Q5T699 404 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 BFARQ9NZS9 450 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 GNPTGQ9UJJ9 305 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 NUDT5Q9UKK9 219 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 FAM240BA0A1B0GVZ2 78 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 TMEM120BA0PK00 339 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-211ENST00000615798 TM9SF1O15321 606 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PRKCBP05771 671 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PDGFRBP09619 1106 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 IFNGR2P38484 337 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 PTK7Q13308 1070 aa9.47□□□□□ -0.89
COL12A1-211ENST00000615798 THEMIS2Q5TEJ8 643 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms