RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 BSPRYQ5W0U4 402 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 KYAT3Q6YP21 454 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 APOBEC2Q9Y235 224 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 ARHGAP10A1A4S6 786 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 PRKCBP05771 671 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SERPINA6P08185 405 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 HOXD12P35452 270 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SERPINB5P36952 375 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SLC5A3P53794 718 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 OXCT1P55809 520 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 DARS2Q6PI48 645 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 UNC5BQ8IZJ1 945 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 PQLC1Q8N2U9 271 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 CPB2Q96IY4 423 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 HEXIM2Q96MH2 286 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 PCYT2Q99447 389 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 PLLPQ9Y342 182 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SNCAIPQ9Y6H5 919 aa13.18□□□□□ -0.3
PPFIA4-210ENST00000599966 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 SPTLC1O15269 473 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 EIF3EP60228 445 aaKnown RBP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 AMHR2Q16671 573 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 ATG16L1Q676U5 607 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 OLFML1Q6UWY5 402 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 XKR5Q6UX68 686 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 ARFGAP1Q8N6T3 406 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 TRPM4Q8TD43 1214 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 FOXP3Q9BZS1 431 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■■■■ 69.1
PPFIA4-210ENST00000599966 SYNJ2BP-COX16A0A087WUM0 186 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 FAM58BPP0C7Q3 252 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 ETFBP38117 255 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 CDKN2BP42772 138 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 FAM102AQ5T9C2 384 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 PHF13Q86YI8 300 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 DHRS4Q9BTZ2 278 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 COX16Q9P0S2 106 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 EBF1Q9UH73 591 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 QSER1Q2KHR3 1735 aa13.17□□□□□ -0.3
PPFIA4-210ENST00000599966 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 M0QYV0 167 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 NEMP1O14524 444 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 LRCH4O75427 683 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 HALP42357 657 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 NAMPTP43490 491 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 CD97P48960 835 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 PRAMEP78395 509 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 ZNF362Q5T0B9 420 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 TRMT10BQ6PF06 316 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 SH2D5Q6ZV89 423 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 RAVER1Q8IY67 606 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 LILRA2Q8N149 483 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 SLC44A1Q8WWI5 657 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 LZICQ8WZA0 190 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 PMM2O15305 246 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 ARIH2O95376 493 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 ITGB3P05106 788 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 P4HA1P13674 534 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 CDH6P55285 790 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 GSTM4Q03013 218 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 CCDC142Q17RM4 750 aa13.16□□□□□ -0.3
PPFIA4-210ENST00000599966 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms