RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 COX16Q9P0S2 106 aa10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 USP36Q9P275 1121 aaKnown RBP10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 SUSD2Q9UGT4 822 aa10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 HBS1LQ9Y450 684 aaKnown RBP10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 CEP83Q9Y592 693 aa10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 ASCC3Q8N3C0 2202 aaKnown RBP10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 KMT2BQ9UMN6 2715 aaPredicted RBP10.59□□□□□ -0.71
LSP1P1-201ENST00000599825 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 A0A1B0GTW7 788 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 A0A1B0GVT2 93 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 KCNK3O14649 394 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 GABBR2O75899 941 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 LTFP02788 710 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 PABPC1P11940 636 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 ACSL1P33121 698 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 USP8P40818 1118 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 CSNK1EP49674 416 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 BECN1Q14457 450 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 EIF4HQ15056 248 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 PM20D1Q6GTS8 502 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 DENND1BQ6P3S1 775 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 PIP4P1Q86T03 277 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 DHX40Q8IX18 779 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 UBR7Q8N806 425 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 ENGASEQ8NFI3 743 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 OR2T3Q8NH03 318 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 MYEOVQ96EZ4 313 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 UBXN6Q9BZV1 441 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 CNGB3Q9NQW8 809 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 ITM2CQ9NQX7 267 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 PLA2G4CQ9UP65 541 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 COQ4Q9Y3A0 265 aa10.58□□□□□ -0.72
LSP1P1-201ENST00000599825 PI4KAP42356 2102 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 CAPN9O14815 690 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 BCAT2O15382 392 aaPredicted RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 GADD45BO75293 160 aaPredicted RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 DNTTP04053 509 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 FTH1P19P0C7X4 201 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 POLR2EP19388 210 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 SLC11A2P49281 568 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 RPS24P62847 133 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 CETN1Q12798 172 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 CDH18Q13634 790 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 TRIP6Q15654 476 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 ADGRF1Q5T601 910 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 RAP1GAP2Q684P5 730 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 GJB7Q6PEY0 223 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 ADAT2Q7Z6V5 191 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 CIR1Q86X95 450 aaPredicted RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 MARCH9Q86YJ5 346 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 ZNF276Q8N554 614 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 WFIKKN2Q8TEU8 576 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 KCTD13Q8WZ19 329 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 GATA6Q92908 595 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 PRICKLE1Q96MT3 831 aaPredicted RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 NUP58Q9BVL2 599 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 SLC2A11Q9BYW1 496 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 INTS2Q9H0H0 1204 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 METTL14Q9HCE5 456 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 ACP6Q9NPH0 428 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 WASF3Q9UPY6 502 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 NAALADL1Q9UQQ1 740 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 FRYQ5TBA9 3013 aa10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 MUC22E2RYF6 1773 aaPredicted RBP10.57□□□□□ -0.72
LSP1P1-201ENST00000599825 TYW5A2RUC4 315 aaKnown RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 METTL12A8MUP2 240 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 THAP12O43422 761 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 ACSL4O60488 711 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 LETM1O95202 739 aaPredicted RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 SEMA4FO95754 770 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 PAEPP09466 180 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 OXTRP30559 389 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 CSKP41240 450 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 MATKP42679 507 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 PSMD8P48556 350 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 ST8SIA6P61647 398 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 RPS14P62263 151 aaKnown RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 BNC1Q01954 994 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 APBA1Q02410 837 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 PTPRNQ16849 979 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 ARHGAP44Q17R89 818 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 HLA-BQ31612 363 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 NUGGCQ68CJ6 796 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
LSP1P1-201ENST00000599825 TAC4Q86UU9 113 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms