RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SCNN1AP37088 669 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 PRKCIP41743 596 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 GRIA2P42262 883 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 SGSHP51688 502 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 ATXN1P54253 815 aaKnown RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 ADKP55263 362 aaKnown RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 SATB1Q01826 763 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 NNTQ13423 1086 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 COL9A2Q14055 689 aaPredicted RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 TRIM14Q14142 442 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 GAS6Q14393 721 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 FYB2Q5VWT5 728 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 NADSYN1Q6IA69 706 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 TRNP1Q6NT89 227 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 TSSK4Q6SA08 328 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 MON1BQ7L1V2 547 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 MCOLN2Q8IZK6 566 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 CFAP52Q8N1V2 620 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 CCDC33Q8N5R6 958 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 P2RY11Q96G91 374 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 NPY6RQ99463 290 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 SIK2Q9H0K1 926 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 PIGVQ9NUD9 493 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 POLR3BQ9NW08 1133 aaPredicted RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 RRN3Q9NYV6 651 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 FBXO4Q9UKT5 387 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 CLEC4EQ9ULY5 219 aa11.5□□□□□ -0.57
LIG1-211ENST00000596457 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
LIG1-211ENST00000596457 CACNA1HO95180 2353 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 TYW5A2RUC4 315 aaKnown RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 ANKRD62A6NC57 917 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 KCNU1A8MYU2 1149 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 CACNG3O60359 315 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 RTN2O75298 545 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 IGLV3-25P01717 112 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SLC2A3P11169 496 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 RRM1P23921 792 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SDC4P31431 198 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 GGCXP38435 758 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 EIF2DP41214 584 aaKnown RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 CXCL12P48061 93 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SLC25A52Q3SY17 297 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 FBXO43Q4G163 708 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 PREPLQ4J6C6 727 aaPredicted RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 SH3PXD2AQ5TCZ1 1133 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 HGSNATQ68CP4 663 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 DCUN1D2Q6PH85 259 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ASCL5Q7RTU5 278 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 FAM217AQ8IXS0 508 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 OLIG1Q8TAK6 271 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SYN2Q92777 582 aaPredicted RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ERLEC1Q96DZ1 483 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 BTN2A3PQ96KV6 586 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 MCEEQ96PE7 176 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SYT11Q9BT88 431 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 TKTL2Q9H0I9 626 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 TMPRSS4Q9NRS4 437 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
LIG1-211ENST00000596457 C2orf42Q9NWW7 574 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 ADAMTS1Q9UHI8 967 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 SNX10Q9Y5X0 201 aa11.49□□□□□ -0.57
LIG1-211ENST00000596457 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 NCOR2Q9Y618 2525 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 F5H5T6 163 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 ATG13O75143 517 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 KLF8O95600 359 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 ADCY5O95622 1261 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 F9P00740 461 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 PENKP01210 267 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 CISD3P0C7P0 127 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 GPD1P21695 349 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms