RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CD19P15391 556 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 ACSL1P33121 698 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 COL9A2Q14055 689 aaPredicted RBP17.06■□□□□ 0.32
LIG1-205ENST00000593425 PTPRNQ16849 979 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 FNDC3BQ53EP0 1204 aaKnown RBP17.06■□□□□ 0.32
LIG1-205ENST00000593425 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 ADIPOR2Q86V24 386 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 UBR7Q8N806 425 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIG1-205ENST00000593425 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 SNX19Q92543 992 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
LIG1-205ENST00000593425 ABCB8Q9NUT2 735 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 HESX1Q9UBX0 185 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
LIG1-205ENST00000593425 ADAMTS20P59510 1910 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 O00370 1275 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 C7P10643 843 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 PABPC1P11940 636 aaKnown RBP17.05■□□□□ 0.32
LIG1-205ENST00000593425 PRCPP42785 496 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 CSNK1EP49674 416 aaKnown RBP17.05■□□□□ 0.32
LIG1-205ENST00000593425 DAOAP59103 153 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 PNOCQ13519 176 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 PKDCCQ504Y2 493 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
LIG1-205ENST00000593425 KIAA0907Q7Z7F0 614 aaPredicted RBP17.05■□□□□ 0.32
LIG1-205ENST00000593425 SIX6OS1Q8N1H7 587 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 WFIKKN2Q8TEU8 576 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 RNF139Q8WU17 664 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 TMA16Q96EY4 203 aaKnown RBP17.05■□□□□ 0.32
LIG1-205ENST00000593425 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 TOR4AQ9NXH8 423 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 GGA2Q9UJY4 613 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 PLXNA2O75051 1894 aa17.05■□□□□ 0.32
LIG1-205ENST00000593425 NYNRINQ9P2P1 1898 aaKnown RBP17.04■□□□□ 0.32
LIG1-205ENST00000593425 GABBR2O75899 941 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 LATS1O95835 1130 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 VDRP11473 427 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 LCP1P13796 627 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 CD70P32970 193 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 PMS1P54277 932 aaKnown RBP17.04■□□□□ 0.32
LIG1-205ENST00000593425 ZNF445P59923 1031 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 RPS14P62263 151 aaKnown RBP17.04■□□□□ 0.32
LIG1-205ENST00000593425 LRMPQ12912 555 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 ADGRF1Q5T601 910 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 MBLAC2Q68D91 279 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 IL27RAQ6UWB1 636 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 LAYNQ6UX15 382 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 DBX2Q6ZNG2 339 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 AHI1Q8N157 1196 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 KCTD13Q8WZ19 329 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 PRSS16Q9NQE7 514 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 ABCC13Q9NSE7 274 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 BTBD3Q9Y2F9 522 aa17.04■□□□□ 0.32
LIG1-205ENST00000593425 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.04■□□□□ 0.32
LIG1-205ENST00000593425 PKD1L2Q7Z442 2459 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 GOLGA6L7A0A1B0GV03 622 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 TRIM49BA6NDI0 452 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 PIK3R2O00459 728 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
LIG1-205ENST00000593425 IGLV3-27P01718 113 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 ATXN1LP0C7T5 689 aaKnown RBP17.03■□□□□ 0.32
LIG1-205ENST00000593425 SETSIPP0DME0 302 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 SLC6A4P31645 630 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 RGS7P49802 495 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 KIF19Q2TAC6 998 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 ANKRD40Q6AI12 368 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 MSANTD2Q6P1R3 559 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 RFWD3Q6PCD5 774 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 MDM1Q8TC05 714 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 SCAND2PQ9GZW5 306 aaPredicted RBP17.03■□□□□ 0.32
LIG1-205ENST00000593425 MTG2Q9H4K7 406 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 PLA2G4CQ9UP65 541 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 PCDHGB2Q9Y5G2 931 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 SNX11Q9Y5W9 270 aa17.03■□□□□ 0.32
LIG1-205ENST00000593425 FLRT2O43155 660 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 SEMA4FO95754 770 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 DLDP09622 509 aaKnown RBP17.02■□□□□ 0.32
LIG1-205ENST00000593425 AFF3P51826 1226 aaKnown RBP17.02■□□□□ 0.32
LIG1-205ENST00000593425 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
LIG1-205ENST00000593425 FAM133BQ5BKY9 247 aaKnown RBP17.02■□□□□ 0.32
LIG1-205ENST00000593425 PIK3R6Q5UE93 754 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 SCML4Q8N228 414 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 RHBDD1Q8TEB9 315 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 CLEC4CQ8WTT0 213 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 BIRC7Q96CA5 298 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 MYO19Q96H55 970 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 ZSWIM1Q9BR11 485 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 BTBD1Q9H0C5 482 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 TM9SF3Q9HD45 589 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 KIAA1522Q9P206 1035 aaPredicted RBP17.02■□□□□ 0.32
LIG1-205ENST00000593425 GPSM3Q9Y4H4 160 aa17.02■□□□□ 0.32
LIG1-205ENST00000593425 CACNA1GO43497 2377 aa17.02■□□□□ 0.31
LIG1-205ENST00000593425 DMXL2Q8TDJ6 3036 aa17.02■□□□□ 0.31
LIG1-205ENST00000593425 KCNK3O14649 394 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms