RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CNGA3Q16281 694 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 ANKRD40Q6AI12 368 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 SULT6B1Q6IMI4 303 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 ZNF280DQ6N043 979 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 KLHL17Q6TDP4 642 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 KYAT3Q6YP21 454 aaKnown RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 ZNF813Q6ZN06 617 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 ZNF575Q86XF7 245 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 C16orf71Q8IYS4 520 aaPredicted RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 OR4N4Q8N0Y3 316 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 ZNF398Q8TD17 642 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 RTKNQ9BST9 563 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 MECRQ9BV79 373 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 QTRT1Q9BXR0 403 aaKnown RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 RNF26Q9BY78 433 aaPredicted RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 NUAK2Q9H093 628 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 MAGEH1Q9H213 219 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 SUDS3Q9H7L9 328 aaPredicted RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 KCNK9Q9NPC2 374 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 KLHL13Q9P2N7 655 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 HERC5Q9UII4 1024 aaKnown RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 PRDM4Q9UKN5 801 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 HEMK1Q9Y5R4 338 aaPredicted RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 WDR17Q8IZU2 1322 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A18PA6NE21 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A16PA6NEW6 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A9PA6NNJ1 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A5PA8MXJ8 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 PPP6CO00743 305 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 RRHO14718 337 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 NBNO60934 754 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 PPP6R2O75170 966 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 TCEA3O75764 348 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 ACTL6BO94805 426 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 LETM1O95202 739 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 TUBB4AP04350 444 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SLC3A2P08195 630 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A15PP0C7V4 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM90A14PP0C7W9 464 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 CERS1P27544 350 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 NDUFS1P28331 727 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SLC8A1P32418 973 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 PNLIPRP1P54315 467 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 MRPS21P82921 87 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 MTA1Q13330 715 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 CBFBQ13951 182 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 ZNF268Q14587 947 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 PFKFB3Q16875 520 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 CCDC142Q17RM4 750 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 AAK1Q2M2I8 961 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 CCDC96Q2M329 555 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 GRAMD1BQ3KR37 738 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SUPT20HL1Q3ZLR7 823 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 TRIM60Q495X7 471 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 COLEC12Q5KU26 742 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 ATPAF1Q5TC12 328 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 ERAP2Q6P179 960 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 TFAP2DQ7Z6R9 452 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 YTHDF3Q7Z739 585 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 SLC44A2Q8IWA5 706 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SRRM1Q8IYB3 904 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 NME8Q8N427 588 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 GALNT16Q8N428 558 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 MYCT1Q8N699 235 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SCAMP5Q8TAC9 235 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 OSR1Q8TAX0 266 aaPredicted RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 STT3BQ8TCJ2 826 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 RSC1A1Q92681 617 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 REXO5Q96IC2 774 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAR2Q96K12 515 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 FAM210AQ96ND0 272 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SORBS1Q9BX66 1292 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 PABPC3Q9H361 631 aaKnown RBP3.92□□□□□ -1.78
VMP1-212ENST00000591782 CCDC134Q9H6E4 229 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 MLXIPQ9HAP2 919 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 ASNSD1Q9NWL6 643 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 MAFFQ9ULX9 164 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 NFU1Q9UMS0 254 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 CNTN6Q9UQ52 1028 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 CECR2Q9BXF3 1484 aa3.92□□□□□ -1.78
VMP1-212ENST00000591782 SLC38A8A6NNN8 435 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 TTC34A8MYJ7 566 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 NKX2-8O15522 239 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 DHX16O60231 1041 aaKnown RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 RNF8O76064 485 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 KAT7O95251 611 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 VEGFAP15692 232 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 SFPQP23246 707 aaKnown RBP eCLIP3.91□□□□□ -1.78
VMP1-212ENST00000591782 HOXD12P35452 270 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 IDUAP35475 653 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 STAT6P42226 847 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 ARHGAP25P42331 645 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 FAM3BP58499 235 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 YPEL5P62699 121 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 AP2B1P63010 937 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 FOXO1Q12778 655 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 SF3A3Q12874 501 aaKnown RBP eCLIP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms