RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 LMNB2Q03252 620 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 PTK6Q13882 451 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 TRIP13Q15645 432 aaPredicted RBP11.77□□□□□ -0.53
TUBD1-211ENST00000591548 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
TUBD1-211ENST00000591548 HECTD3Q5T447 861 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 POTEHQ6S545 545 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 SYDE1Q6ZW31 735 aaPredicted RBP11.77□□□□□ -0.53
TUBD1-211ENST00000591548 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 ITIH5Q86UX2 942 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 ZC3H18Q86VM9 953 aaKnown RBP11.77□□□□□ -0.53
TUBD1-211ENST00000591548 ALLCQ8N6M5 410 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 CDK5RAP1Q96SZ6 601 aaKnown RBP11.77□□□□□ -0.53
TUBD1-211ENST00000591548 PBX4Q9BYU1 374 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 SIK2Q9H0K1 926 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 CERS4Q9HA82 394 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 PRDM16Q9HAZ2 1276 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 SNX24Q9Y343 169 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 ASB3Q9Y575 518 aa11.77□□□□□ -0.53
TUBD1-211ENST00000591548 C2orf78A6NCI8 922 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 MCF2LO15068 1137 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 DCLK1O15075 740 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 COCHO43405 550 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 GAS8O95995 478 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 HMBSP08397 361 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 SLC2A3P11169 496 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 ERCC2P18074 760 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 IVDP26440 423 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 PPP3CCP48454 512 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 NR2C2P49116 596 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 ZNF135P52742 658 aaPredicted RBP11.76□□□□□ -0.53
TUBD1-211ENST00000591548 GDF10P55107 478 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 MLLT6P55198 1093 aaPredicted RBP11.76□□□□□ -0.53
TUBD1-211ENST00000591548 TPI1P60174 286 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 RING1Q06587 406 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 GPM6BQ13491 265 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 CUL1Q13616 776 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 PIK3R6Q5UE93 754 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 MANEALQ5VSG8 457 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 GSTA5Q7RTV2 222 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 UNC45BQ8IWX7 931 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
TUBD1-211ENST00000591548 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
TUBD1-211ENST00000591548 EPAS1Q99814 870 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 LRRC3Q9BY71 257 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 RNF38Q9H0F5 515 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 NEUROG2Q9H2A3 272 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 ZNF446Q9NWS9 450 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 GRHL1Q9NZI5 618 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 DTLQ9NZJ0 730 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 UXTQ9UBK9 157 aaPredicted RBP11.76□□□□□ -0.53
TUBD1-211ENST00000591548 DNMT3LQ9UJW3 386 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 HS3ST4Q9Y661 456 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 TRANK1O15050 2925 aa11.76□□□□□ -0.53
TUBD1-211ENST00000591548 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 H0YGN5 161 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TP73O15350 636 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 MFSD11O43934 449 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 LPXNO60711 386 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 CLASP2O75122 1294 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ERLIN1O75477 346 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 KRT14P02533 472 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 LRG1P02750 347 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ZSCAN5DPP0CG00 497 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ETS1P14921 441 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 EPHB2P29323 1055 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TUBP50607 506 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 KCNQ1P51787 676 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 PAFAH1B3Q15102 231 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TADA2BQ86TJ2 420 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 CCDC33Q8N5R6 958 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NETO2Q8NC67 525 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 SLC22A17Q8WUG5 538 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 C1orf74Q96LT6 269 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 OLFM3Q96PB7 478 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NKX2-4Q9H2Z4 354 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 USP29Q9HBJ7 922 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ARFGAP3Q9NP61 516 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 FAM114A2Q9NRY5 505 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ZDHHC18Q9NUE0 388 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 CDH23Q9H251 3354 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 H7C0C1 242 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 SGK1O00141 431 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 C1RP00736 705 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 APOEP02649 317 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms