RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 VCPIP1Q96JH7 1222 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 DNAJC7Q99615 494 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 POLR3BQ9NW08 1133 aaPredicted RBP16.71■□□□□ 0.27
GCDH-210ENST00000590445 EBF1Q9UH73 591 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 SFMBT1Q9UHJ3 866 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 GMEB2Q9UKD1 530 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
GCDH-210ENST00000590445 AXIN1O15169 862 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 PENKP01210 267 aaPredicted RBP16.7■□□□□ 0.26
GCDH-210ENST00000590445 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
GCDH-210ENST00000590445 SKILP12757 684 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 HOXC13P31276 330 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 GBP1P32455 592 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 MATKP42679 507 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 PXNP49023 591 aaPredicted RBP16.7■□□□□ 0.26
GCDH-210ENST00000590445 DGKGP49619 791 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 DGKEP52429 567 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 TAF5Q15542 800 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 EMC10Q5UCC4 262 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 NUGGCQ68CJ6 796 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 HGSNATQ68CP4 663 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 UNC45BQ8IWX7 931 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 FAM217AQ8IXS0 508 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 DEFB106AQ8N104 65 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 ALLCQ8N6M5 410 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 IL17RCQ8NAC3 791 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 TXNDC5Q8NBS9 432 aaKnown RBP16.7■□□□□ 0.26
GCDH-210ENST00000590445 GAB3Q8WWW8 586 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 BHMTQ93088 406 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
GCDH-210ENST00000590445 STAP1Q9ULZ2 295 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 TLR6Q9Y2C9 796 aa16.7■□□□□ 0.26
GCDH-210ENST00000590445 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 MFAP3LO75121 409 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 TBX4P57082 545 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 PTP4A2Q12974 167 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 TBX2Q13207 712 aaPredicted RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 SRSF5Q13243 272 aaKnown RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 CRY1Q16526 586 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 FYB2Q5VWT5 728 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 MON1BQ7L1V2 547 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 GPR161Q8N6U8 529 aaKnown RBP16.69■□□□□ 0.26
GCDH-210ENST00000590445 ABHD10Q9NUJ1 306 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 PLK2Q9NYY3 685 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 FBXO10Q9UK96 956 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 STARD13Q9Y3M8 1113 aa16.69■□□□□ 0.26
GCDH-210ENST00000590445 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 GOLGA8SH3BPF8 625 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 DDX3XO00571 662 aaKnown RBP eCLIP16.68■□□□□ 0.261e-7■■□□□ 11.8
GCDH-210ENST00000590445 TRIM24O15164 1050 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 IRAK2O43187 625 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 MSI1O43347 362 aaKnown RBP16.68■□□□□ 0.26
GCDH-210ENST00000590445 RTN2O75298 545 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 GRAP2O75791 330 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 ALDH1A2O94788 518 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 IGLV3-25P01717 112 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 IGLV3-27P01718 113 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 CISD3P0C7P0 127 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 MTA1Q13330 715 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 LPAL2Q16609 132 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 MPPE1Q53F39 396 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 C2CD6Q53TS8 623 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 ADGRF1Q5T601 910 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.68■□□□□ 0.26
GCDH-210ENST00000590445 TAC4Q86UU9 113 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 MCOLN2Q8IZK6 566 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 ZNF513Q8N8E2 541 aaPredicted RBP16.68■□□□□ 0.26
GCDH-210ENST00000590445 C3orf20Q8ND61 904 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 OLIG1Q8TAK6 271 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 DDI1Q8WTU0 396 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 AZIN2Q96A70 460 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 TRIM11Q96F44 468 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
GCDH-210ENST00000590445 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 SLC2A11Q9BYW1 496 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 FAM204AQ9H8W3 233 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
GCDH-210ENST00000590445 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 STOML2Q9UJZ1 356 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 TMEM59LQ9UK28 342 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 SLC27A6Q9Y2P4 619 aa16.68■□□□□ 0.26
GCDH-210ENST00000590445 MYO18AQ92614 2054 aaKnown RBP16.68■□□□□ 0.26
GCDH-210ENST00000590445 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 SSU72P8A0A1W2PR75 194 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 SGK1O00141 431 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 F9P00740 461 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 RETP07949 1114 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 SLC2A3P11169 496 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 SLC11A2P49281 568 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 RNASE9P60153 205 aaKnown RBP16.67■□□□□ 0.26
GCDH-210ENST00000590445 RASSF3Q86WH2 238 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 DCLK2Q8N568 766 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 NT5C3BQ969T7 300 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 SLC39A13Q96H72 371 aa16.67■□□□□ 0.26
GCDH-210ENST00000590445 NPY6RQ99463 290 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms