RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SNX12Q9UMY4 172 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KCNK3O14649 394 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GREM1O60565 184 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PAGE1O75459 146 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZRANB2O95218 330 aaKnown RBP eCLIP16.94■□□□□ 0.37e-19■□□□□ 10
CDK5RAP3-228ENST00000583363 APOEP02649 317 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KLKB1P03952 638 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PYGMP11217 842 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KDELR1P24390 212 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 L1CAMP32004 1257 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AVPR1AP37288 418 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MLLT6P55198 1093 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MTA1Q13330 715 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DPYSL2Q16555 572 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 EFHC2Q5JST6 749 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ARID3BQ8IVW6 561 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 NPAS3Q8IXF0 933 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KCTD6Q8NC69 237 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SMRP1Q8NCR6 262 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KIF18AQ8NI77 898 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SUSD6Q92537 303 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF592Q92610 1267 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 EDAQ92838 391 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FGF13Q92913 245 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 USP13Q92995 863 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PBKQ96KB5 322 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 C1orf74Q96LT6 269 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SLITRK6Q9H5Y7 841 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GDE1Q9NZC3 331 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AP4E1Q9UPM8 1137 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SAR1BQ9Y6B6 198 aa16.94■□□□□ 0.3
CDK5RAP3-228ENST00000583363 C3orf70A6NLC5 250 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 LEFTY2O00292 366 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TCF3P15923 654 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TCP1P17987 556 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AMPD2Q01433 879 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PDK2Q15119 407 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZFYVE27Q5T4F4 411 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DCAF12L1Q5VU92 463 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PYROXD2Q8N2H3 581 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 RNF25Q96BH1 459 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 BTN2A3PQ96KV6 586 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 NECTIN4Q96NY8 510 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KCTD15Q96SI1 283 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SMG9Q9H0W8 520 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CARD9Q9H257 536 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DHX35Q9H5Z1 703 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KLHL11Q9NVR0 708 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 XPO7Q9UIA9 1087 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CDH7Q9ULB5 785 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SNX10Q9Y5X0 201 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 HS3ST4Q9Y661 456 aa16.93■□□□□ 0.3
CDK5RAP3-228ENST00000583363 LOC730098B7Z3J9 87 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CES2O00748 559 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ACSL4O60488 711 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SRGAP2O75044 1071 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MOCS2O96007 188 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KRT1P04264 644 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CD48P09326 243 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 IRF1P10914 325 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 IL4RP24394 825 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CORO1AP31146 461 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CXCR5P32302 372 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CDH6P55285 790 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TAZQ16635 292 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ACBD5Q5T8D3 534 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MFSD7Q6UXD7 560 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 HTR3DQ70Z44 454 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GET4Q7L5D6 327 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DDX42Q86XP3 938 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZSCAN18Q8TBC5 510 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SH3RF2Q8TEC5 729 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PSMB7Q99436 277 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PHOX2BQ99453 314 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PCDH18Q9HCL0 1135 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 STOML2Q9UJZ1 356 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AGO1Q9UL18 857 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CCL26Q9Y258 94 aa16.92■□□□□ 0.3
CDK5RAP3-228ENST00000583363 LRRD1A4D1F6 860 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM72CH0Y354 149 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 LATS1O95835 1130 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SLC11A2P49281 568 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 COPS2P61201 443 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 NRG1Q02297 640 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SEMA3BQ13214 749 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF211Q13398 564 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KRT81Q14533 505 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms