RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC41A1Q8IVJ1 513 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 FIBINQ8TAL6 211 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC39A13Q96H72 371 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 MKRN2Q9H000 416 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 INTS2Q9H0H0 1204 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 SFMBT1Q9UHJ3 866 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 PLA2G4CQ9UP65 541 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 FRYQ5TBA9 3013 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 CHD6Q8TD26 2715 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 WASH3PC4AMC7 463 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 ARHGAP33O14559 1287 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 ACSL4O60488 711 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 FYNP06241 537 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 DLDP09622 509 aaKnown RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 WASP42768 502 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 COPAP53621 1224 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 EIF4EBP2Q13542 120 aaPredicted RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 FAM133BQ5BKY9 247 aaKnown RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 PSAPL1Q6NUJ1 521 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 ADIPOR2Q86V24 386 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 TMPRSS6Q8IU80 811 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 MLKLQ8NB16 471 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 OR2T3Q8NH03 318 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 NDRG1Q92597 394 aaKnown RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 EDEM1Q92611 657 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 PRCCQ92733 491 aaPredicted RBP15.08■□□□□ 0
SMARCE1-216ENST00000580419 KAT5Q92993 513 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 BHMTQ93088 406 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 TTC17Q96AE7 1141 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 SIPA1Q96FS4 1042 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 LMLNQ96KR4 655 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 MED15Q96RN5 788 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 SLC32A1Q9H598 525 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 THAP9Q9H5L6 903 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 ASNSD1Q9NWL6 643 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 CLEC4EQ9ULY5 219 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 SCML1Q9UN30 329 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 CYP8B1Q9UNU6 501 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 WASF3Q9UPY6 502 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 CTNND2Q9UQB3 1225 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 NUMA1Q14980 2115 aa15.08■□□□□ 0
SMARCE1-216ENST00000580419 IGLV3-25P01717 112 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ASLP04424 464 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ZNF883P0CG24 379 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 PABPC1P11940 636 aaKnown RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 LCP1P13796 627 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 BRD2P25440 801 aaKnown RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 NOVA1P51513 510 aaKnown RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 TPMTP51580 245 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 TBX4P57082 545 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ARID5AQ03989 594 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 SH3PXD2AQ5TCZ1 1133 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ISM2Q6H9L7 571 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 SERPINA13PQ6UXR4 307 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 RRAGAQ7L523 313 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ARHGEF19Q8IW93 802 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 HJURPQ8NCD3 748 aaPredicted RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 ZNF606Q8WXB4 792 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 HSPA12BQ96MM6 686 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 APEX2Q9UBZ4 518 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 SUN2Q9UH99 717 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 GGA2Q9UJY4 613 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 TPX2Q9ULW0 747 aaKnown RBP15.07■□□□□ 0
SMARCE1-216ENST00000580419 RAD54BQ9Y620 910 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 ADAMTS9Q9P2N4 1935 aa15.07■□□□□ 0
SMARCE1-216ENST00000580419 A0A1B0GTW7 788 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 TYW5A2RUC4 315 aaKnown RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 METTL12A8MUP2 240 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 H0Y626 953 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 GADD45BO75293 160 aaPredicted RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 GJB3O75712 270 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 TRIM16O95361 564 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 SLC2A3P11169 496 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 SNX16P57768 344 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 SFSWAPQ12872 951 aaKnown RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 SLC12A1Q13621 1099 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 PTPRNQ16849 979 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 GBP6Q6ZN66 633 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 HDDC3Q8N4P3 179 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 DQX1Q8TE96 717 aaKnown RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 SHC3Q92529 594 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 TOE1Q96GM8 510 aaKnown RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 FCRL2Q96LA5 508 aaPredicted RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 CIPCQ9C0C6 399 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 LHX5Q9H2C1 402 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 POPDC2Q9HBU9 364 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 UBE2TQ9NPD8 197 aaPredicted RBP15.06■□□□□ 0
SMARCE1-216ENST00000580419 PCDHGC3Q9UN70 934 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 IGF2RP11717 2491 aa15.06■□□□□ 0
SMARCE1-216ENST00000580419 KNTC1P50748 2209 aa15.05■□□□□ 0
SMARCE1-216ENST00000580419 MSI1O43347 362 aaKnown RBP15.05■□□□□ -0
SMARCE1-216ENST00000580419 OPHN1O60890 802 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 EPHX1P07099 455 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms