RNA–Protein interactions for RNA: ENST00000580388.5

TRIM16-220, Transcript of tripartite motif containing 16, humanhuman

TSL 5

Gene TRIM16, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-220ENST00000580388 CDKL3Q8IVW4 592 aaPredicted RBP9.47□□□□□ -0.89
TRIM16-220ENST00000580388 RNF168Q8IYW5 571 aaPredicted RBP9.47□□□□□ -0.89
TRIM16-220ENST00000580388 DCP1BQ8IZD4 617 aaKnown RBP9.47□□□□□ -0.89
TRIM16-220ENST00000580388 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 LGMNQ99538 433 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 TKTL2Q9H0I9 626 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 RRN3Q9NYV6 651 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 GMIPQ9P107 970 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 XPO7Q9UIA9 1087 aaKnown RBP9.47□□□□□ -0.89
TRIM16-220ENST00000580388 ATP11BQ9Y2G3 1177 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
TRIM16-220ENST00000580388 PRUNE2Q8WUY3 3088 aa9.46□□□□□ -0.89
TRIM16-220ENST00000580388 LAMA2P24043 3122 aaKnown RBP9.46□□□□□ -0.89
TRIM16-220ENST00000580388 FAM92AA1XBS5 289 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 TRIM43BA6NCK2 446 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 C5orf60A6NFR6 353 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 F5H423 210 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 RASGRF2O14827 1237 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 TRAPPC3O43617 180 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 AVILO75366 819 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 LRIG2O94898 1065 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 ABHD2P08910 425 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 HAPLN1P10915 354 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 RPL17P18621 184 aaKnown RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 COL9A1P20849 921 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 HCAR3P49019 387 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 NR2C2P49116 596 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 GNGT1P63211 74 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 DEFB103AP81534 67 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 WASHC5Q12768 1159 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 EFTUD2Q15029 972 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 NFE2Q16621 373 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 RASIP1Q5U651 963 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 MANEALQ5VSG8 457 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 ZNF280DQ6N043 979 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 MFSD5Q6N075 450 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 VSTM1Q6UX27 236 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 PCGF5Q86SE9 256 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 C14orf80Q86SX3 495 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 CAND1Q86VP6 1230 aaKnown RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 ZBED8Q8IZ13 594 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 NUP93Q8N1F7 819 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 MDM1Q8TC05 714 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 DEPDC1BQ8WUY9 529 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 TRIM43Q96BQ3 446 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 FUBP3Q96I24 572 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 GORASP1Q9BQQ3 440 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 CAPS2Q9BXY5 557 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 CEP41Q9BYV8 373 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 ROPN1BQ9BZX4 212 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 TSPYL1Q9H0U9 437 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 PRDM12Q9H4Q4 367 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 WDCPQ9H6R7 721 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 ROPN1Q9HAT0 212 aaPredicted RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 RAB6BQ9NRW1 208 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 PAK5Q9P286 719 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 SCML2Q9UQR0 700 aa9.46□□□□□ -0.9
TRIM16-220ENST00000580388 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 NYNRINQ9P2P1 1898 aaKnown RBP9.46□□□□□ -0.9
TRIM16-220ENST00000580388 DOCK4Q8N1I0 1966 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 GOLGA6L10A6NI86 522 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 KCNU1A8MYU2 1149 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 HACD1B0YJ81 288 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 CHADO15335 359 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 RGS16O15492 202 aaPredicted RBP9.45□□□□□ -0.9
TRIM16-220ENST00000580388 HOXA2O43364 376 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 PAGE1O75459 146 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 PIAS1O75925 651 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 F9P00740 461 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 C1QAP02745 245 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 CAPN2P17655 700 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 ATF6P18850 670 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 SSTR1P30872 391 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 MDH1P40925 334 aaKnown RBP9.45□□□□□ -0.9
TRIM16-220ENST00000580388 GRIA1P42261 906 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 AIF1P55008 147 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 ARL4CP56559 192 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 TPI1P60174 286 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 PPP2R2AP63151 447 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 GPR17Q13304 367 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 HIF1AQ16665 826 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 BBS9Q3SYG4 887 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 ANKRD20A2Q5SQ80 823 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 ANKRD20A1Q5TYW2 823 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 ANKRD20A3Q5VUR7 823 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 BTBD8Q5XKL5 378 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 MSANTD2Q6P1R3 559 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 CNKSR3Q6P9H4 555 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 FOXR1Q6PIV2 292 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 CENPUQ71F23 418 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 EXOC3L1Q86VI1 746 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
TRIM16-220ENST00000580388 FBXO36Q8NEA4 188 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms