RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MMS19Q96T76 1030 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 C7orf25Q9BPX7 421 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 ARRDC1-AS1Q9H2J1 176 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 TNMDQ9H2S6 317 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 DPEP3Q9H4B8 488 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 SMOC1Q9H4F8 434 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 ECT2Q9H8V3 914 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 PRDM16Q9HAZ2 1276 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 AGPAT3Q9NRZ7 376 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 RXFP3Q9NSD7 469 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 TMEM30AQ9NV96 361 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 MAGEC2Q9UBF1 373 aaPredicted RBP6.63□□□□□ -1.35
NUP88-212ENST00000576708 CDH9Q9ULB4 789 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 PPT2Q9UMR5 302 aa6.63□□□□□ -1.35
NUP88-212ENST00000576708 MORC2Q9Y6X9 1032 aaPredicted RBP6.63□□□□□ -1.35
NUP88-212ENST00000576708 DNAH14Q0VDD8 3507 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 TRAV19A0A0A6YYK7 116 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 F8VP50 259 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 LEFTY2O00292 366 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 DCLK1O15075 740 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 EIF3DO15371 548 aaKnown RBP eCLIP6.62□□□□□ -1.35
NUP88-212ENST00000576708 CUTAO60888 179 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 PPP6R2O75170 966 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 YEATS4O95619 227 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 FAM87AP0C7U9 286 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 PTPN1P18031 435 aaKnown RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 HDCP19113 662 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 TNNI1P19237 187 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ITGB7P26010 798 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 GNL1P36915 607 aaPredicted RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 MAGEA11P43364 429 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 RAP1GAPP47736 663 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SLC6A11P48066 632 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 IFNAR2P48551 515 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZNF165P49910 485 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 CDH8P55286 799 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 MYL6P60660 151 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ARHGAP8P85298 464 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 CYP24A1Q07973 514 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 MESP2Q0VG99 397 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 PKP1Q13835 747 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZNF268Q14587 947 aaPredicted RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 PSMD6Q15008 389 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 PDGFRLQ15198 375 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 CSRP2Q16527 193 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SNRNP35Q16560 246 aaKnown RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 STXBP4Q6ZWJ1 553 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 DPH6Q7L8W6 267 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZAR1Q86SH2 424 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 WDR49Q8IV35 697 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 MCATQ8IVS2 390 aaKnown RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 SFTPA1Q8IWL2 248 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 IQUBQ8NA54 791 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 FAM13CQ8NE31 585 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 OR6B3Q8NGW1 331 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 OSCP1Q8WVF1 389 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 GAB3Q8WWW8 586 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 FUBP3Q96I24 572 aaKnown RBP eCLIP6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZNF396Q96N95 335 aaPredicted RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 CGRRF1Q99675 332 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 B3GNT5Q9BYG0 378 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SNX25Q9H3E2 840 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 KIF9Q9HAQ2 790 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 UXTQ9UBK9 157 aaPredicted RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 PCDHA7Q9UN72 937 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 SLC8A2Q9UPR5 921 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 INVSQ9Y283 1065 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 R3HCC1Q9Y3T6 440 aaKnown RBP6.62□□□□□ -1.35
NUP88-212ENST00000576708 DENND4CQ5VZ89 1909 aa6.62□□□□□ -1.35
NUP88-212ENST00000576708 ZNF840PA6NDX5 716 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 KIAA0391O15091 583 aaKnown RBP6.61□□□□□ -1.35
NUP88-212ENST00000576708 RPP40O75818 363 aaKnown RBP6.61□□□□□ -1.35
NUP88-212ENST00000576708 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
NUP88-212ENST00000576708 DRD1P21728 446 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ANXA13P27216 316 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 HOXA6P31267 233 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CNR2P34972 360 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 OPRD1P41143 372 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ME1P48163 572 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 TNNC1P63316 161 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 AMPD3Q01432 767 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 TAF10Q12962 218 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 DMC1Q14565 340 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 KCNB1Q14721 858 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SURF1Q15526 300 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 GAB4Q2WGN9 574 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 WDR72Q3MJ13 1102 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 TDRD10Q5VZ19 366 aaKnown RBP6.61□□□□□ -1.35
NUP88-212ENST00000576708 CNNM4Q6P4Q7 775 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 VSTM1Q6UX27 236 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SCARA5Q6ZMJ2 495 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms