RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 SKAP1Q86WV1 359 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 SCARB1Q8WTV0 552 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 STYXQ8WUJ0 223 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 WDR60Q8WVS4 1066 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 DDX23Q9BUQ8 820 aaKnown RBP3.74□□□□□ -1.81
CDC27-218ENST00000575830 MLXIPQ9HAP2 919 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 NRIP3Q9NQ35 241 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 B3GNT3Q9Y2A9 372 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 PCDHB7Q9Y5E2 793 aa3.74□□□□□ -1.81
CDC27-218ENST00000575830 KCNU1A8MYU2 1149 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 PPEF2O14830 753 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 INPPL1O15357 1258 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 DNPH1O43598 174 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 ARHGAP25P42331 645 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 ALDH18A1P54886 795 aaKnown RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 POLE2P56282 527 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 RPS13P62277 151 aaKnown RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 LAMB3Q13751 1172 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 PUM3Q15397 648 aaKnown RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 Q4G0T1 1027 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 TTC30AQ86WT1 665 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 GATAD2AQ86YP4 633 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 CACNA2D3Q8IZS8 1091 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 ZNF527Q8NB42 609 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 OR52N4Q8NGI2 321 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 MSI2Q96DH6 328 aaKnown RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 FAR2Q96K12 515 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 PRPF18Q99633 342 aaKnown RBP3.73□□□□□ -1.81
CDC27-218ENST00000575830 CRB3Q9BUF7 120 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 EPS8L2Q9H6S3 715 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 IL21RQ9HBE5 538 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 TXNRD2Q9NNW7 524 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 PRDM8Q9NQV8 689 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 FBXO28Q9NVF7 368 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 ASNSD1Q9NWL6 643 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 CNTN6Q9UQ52 1028 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 LRCH1Q9Y2L9 728 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 ZMYM2Q9UBW7 1377 aa3.73□□□□□ -1.81
CDC27-218ENST00000575830 SLC38A8A6NNN8 435 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 M0QYT0 321 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 SKAP2O75563 359 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 RNF8O76064 485 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 LARGE1O95461 756 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 FGBP02675 491 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 WNT1P04628 370 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 VEGFAP15692 232 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 SLC8A1P32418 973 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 FAM3BP58499 235 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 RBM6P78332 1123 aaKnown RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 B4GALNT1Q00973 533 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ETFDHQ16134 617 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 GLE1Q53GS7 698 aaKnown RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 CC2D1BQ5T0F9 858 aaKnown RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 TTC22Q5TAA0 569 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 TTLL5Q6EMB2 1281 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 LIN54Q6MZP7 749 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 WDR93Q6P2C0 686 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 SLC39A5Q6ZMH5 540 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 PAQR4Q8N4S7 273 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 OTUD7AQ8TE49 926 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 ZFPM2Q8WW38 1151 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 SMG7Q92540 1137 aaKnown RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 PMM1Q92871 262 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ATP2A3Q93084 1043 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 VCPIP1Q96JH7 1222 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ZFYVE19Q96K21 471 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ZNF48Q96MX3 618 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 SPRTNQ9H040 489 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 VPS16Q9H269 839 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ABHD16BQ9H3Z7 469 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 SLC22A11Q9NSA0 550 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 HERC5Q9UII4 1024 aaKnown RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 VPS4AQ9UN37 437 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
CDC27-218ENST00000575830 CACNA1IQ9P0X4 2223 aa3.72□□□□□ -1.81
CDC27-218ENST00000575830 TTBK1Q5TCY1 1321 aaPredicted RBP3.71□□□□□ -1.81
CDC27-218ENST00000575830 EMSYQ7Z589 1322 aa3.71□□□□□ -1.81
CDC27-218ENST00000575830 TRBV5-3A0A0A0MS03 114 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 A0A0G2JK05 382 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 SLC22A23A1A5C7 686 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 MBD3L5A6NJ08 208 aaPredicted RBP3.71□□□□□ -1.82
CDC27-218ENST00000575830 USP12O75317 370 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 TNFRSF6BO95407 300 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 CSTBP04080 98 aaKnown RBP3.71□□□□□ -1.82
CDC27-218ENST00000575830 YY1P25490 414 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 NR4A2P43354 598 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 ICA1Q05084 483 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 CBFBQ13951 182 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 TUBB8Q3ZCM7 444 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 ASPHD1Q5U4P2 390 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 RINT1Q6NUQ1 792 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 RTL10Q7L3V2 364 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 RHPN2Q8IUC4 686 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 SLC44A2Q8IWA5 706 aaPredicted RBP3.71□□□□□ -1.82
CDC27-218ENST00000575830 ADGRF3Q8IZF5 1079 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 SLC2A12Q8TD20 617 aa3.71□□□□□ -1.82
CDC27-218ENST00000575830 DENND1AQ8TEH3 1009 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms