RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NUP205Q92621 2012 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 A0A1W2PPC4 97 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 SLC12A8A0AV02 714 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 J3QKU1 62 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 LATS1O95835 1130 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 HLA-FP30511 346 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 NASPP49321 788 aaPredicted RBP9.4□□□□□ -0.9
SMG6-218ENST00000575454 ST8SIA6P61647 398 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 YWHAGP61981 247 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG6-218ENST00000575454 IL9RQ01113 521 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 CFHR1Q03591 330 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 EHHADHQ08426 723 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 STK38Q15208 465 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.9
SMG6-218ENST00000575454 SLC45A4Q5BKX6 768 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 MPP7Q5T2T1 576 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 HES3Q5TGS1 186 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 SV2AQ7L0J3 742 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG6-218ENST00000575454 PLEKHO2Q8TD55 490 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 SAP25Q8TEE9 199 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 DHX58Q96C10 678 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 TMEM176AQ96HP8 235 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 ARID3AQ99856 593 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 PRSS16Q9NQE7 514 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 OLA1Q9NTK5 396 aaKnown RBP9.4□□□□□ -0.9
SMG6-218ENST00000575454 DMAC2Q9NW81 257 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 HMGXB4Q9UGU5 601 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 GGA2Q9UJY4 613 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 STOML2Q9UJZ1 356 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 CLEC4EQ9ULY5 219 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 FRMD4BQ9Y2L6 1034 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 HBS1LQ9Y450 684 aaKnown RBP9.4□□□□□ -0.9
SMG6-218ENST00000575454 SLCO1B1Q9Y6L6 691 aa9.4□□□□□ -0.9
SMG6-218ENST00000575454 ATMQ13315 3056 aa9.4□□□□□ -0.91
SMG6-218ENST00000575454 TLX3O43711 291 aaPredicted RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 PPP6R2O75170 966 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 IGHV4-34P06331 123 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 PABPC1P11940 636 aaKnown RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 CKMT2P17540 419 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 POLR2EP19388 210 aaKnown RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 SYT1P21579 422 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 CD38P28907 300 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 PIK3CAP42336 1068 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 ACADVLP49748 655 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 UCNP55089 124 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 TLE3Q04726 772 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 KCNT1Q5JUK3 1230 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 ADGRF1Q5T601 910 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 LAYNQ6UX15 382 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 CHST9Q7L1S5 443 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 ADIPOR2Q86V24 386 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 KDM1BQ8NB78 822 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 LINC00301Q8NCQ3 95 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 ORAI3Q9BRQ5 295 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 PABPC3Q9H361 631 aaKnown RBP9.39□□□□□ -0.91
SMG6-218ENST00000575454 ERVMER34-1Q9H9K5 563 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 AASDHPPTQ9NRN7 309 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 ABCB8Q9NUT2 735 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 FBXL12Q9NXK8 326 aa9.39□□□□□ -0.91
SMG6-218ENST00000575454 FAM47DPA6NHR8 397 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 PDXKO00764 312 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 MAPK13O15264 365 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 SPTLC2O15270 562 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 IRAK2O43187 625 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 MAGEC1O60732 1142 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 ZBED1O96006 694 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 HLA-DRAP01903 254 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 ASLP04424 464 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 GLDCP23378 1020 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 EPHA8P29322 1005 aaPredicted RBP9.38□□□□□ -0.91
SMG6-218ENST00000575454 RXRGP48443 463 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 CCR5P51681 352 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 GALCP54803 685 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 E2F1Q01094 437 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 RHDQ02161 417 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 ENPEPQ07075 957 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 DNAJC3Q13217 504 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 CUL4AQ13619 759 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 KMT5BQ4FZB7 885 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 TAF1BQ53T94 588 aaPredicted RBP9.38□□□□□ -0.91
SMG6-218ENST00000575454 RAB41Q5JT25 222 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms