RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CKLFQ9UBR5 152 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 GTF3C4Q9UKN8 822 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 PNPLA7Q6ZV29 1317 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 COL15A1P39059 1388 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 UGGT1Q9NYU2 1555 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 H3BNH8 94 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 BAIAP3O94812 1187 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 COMTP21964 271 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 FRG1Q14331 258 aaKnown RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 TOMM20Q15388 145 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 SLC45A4Q5BKX6 768 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CCNI2Q6ZMN8 369 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 USP38Q8NB14 1042 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ANKS1AQ92625 1134 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 PPP1R16AQ96I34 528 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 MS4A14Q96JA4 679 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RBM7Q9Y580 266 aaKnown RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 IRGMA1A4Y4 181 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 PHGDHO43175 533 aaKnown RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 SOX11P35716 441 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CDK7P50613 346 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ACTR3P61158 418 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 DNAJC3Q13217 504 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RETSATQ6NUM9 610 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 EEF1AKMT1Q8WVE0 214 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 C1QTNF1Q9BXJ1 281 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ANTXR1Q9H6X2 564 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 NMRAL1Q9HBL8 299 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 MYRFQ9Y2G1 1151 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 PCDHGB3Q9Y5G1 929 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 NTSP30990 170 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RASA2Q15283 850 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 LRRC74BQ6ZQY2 392 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CXXC5Q7LFL8 322 aaKnown RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 ZDHHC17Q8IUH5 632 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 FAM111AQ96PZ2 611 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 NOD2Q9HC29 1040 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 TMEM138Q9NPI0 162 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 UXTQ9UBK9 157 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 HEY2Q9UBP5 337 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ALG6Q9Y672 507 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 SSNA1O43805 119 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 GCATO75600 419 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CYP1A1P04798 512 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 TPP2P29144 1249 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 FCGRTP55899 365 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CUL2Q13617 745 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 SAMD3Q8N6K7 520 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ZFP28Q8NHY6 868 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 REEP2Q9BRK0 252 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 POLR1BQ9H9Y6 1135 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 NDUFAF1Q9Y375 327 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RGS14O43566 566 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 CPSF4O95639 269 aaKnown RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 TOP3AQ13472 1001 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 ACAD10Q6JQN1 1059 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 OR56A4Q8NGH8 313 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 WDR60Q8WVS4 1066 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 MTMR12Q9C0I1 747 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 GPRC5DQ9NZD1 345 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 IGSF1Q8N6C5 1336 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 C1orf232A0A0U1RR37 186 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 COILP38432 576 aaPredicted RBP10.25□□□□□ -0.77
USP6-205ENST00000574788 MCL1Q07820 350 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 FAM126BQ8IXS8 530 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 COLGALT2Q8IYK4 626 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RXFP1Q9HBX9 757 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 BTBD7Q9P203 1132 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 RAB23Q9ULC3 237 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
USP6-205ENST00000574788 XYLBO75191 536 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 RTN3O95197 1032 aaPredicted RBP10.24□□□□□ -0.77
USP6-205ENST00000574788 UGT1A5P35504 534 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 CCR4P51679 360 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 SPIDRQ14159 915 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 RASSF6Q6ZTQ3 369 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 GAS2L3Q86XJ1 694 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 PSMA8Q8TAA3 256 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 TPD52L3Q96J77 140 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 TBC1D30Q9Y2I9 924 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 NEDD4P46934 1319 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 THP07101 528 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 CTSHP09668 335 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 OGNP20774 298 aaKnown RBP10.24□□□□□ -0.77
USP6-205ENST00000574788 TRIM2Q9C040 744 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 METTL5Q9NRN9 209 aaKnown RBP10.24□□□□□ -0.77
USP6-205ENST00000574788 LRCH1Q9Y2L9 728 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 A0A087WWV3 80 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 C2CD2LO14523 706 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 KCNQ3O43525 872 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 RHOCP08134 193 aa10.24□□□□□ -0.77
USP6-205ENST00000574788 CAPGP40121 348 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms