RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 DCDC5Q6ZRR9 648 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 CACNA2D3Q8IZS8 1091 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 FAM71DQ8N9W8 422 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 ATG16L2Q8NAA4 619 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 RSC1A1Q92681 617 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 KAZALD1Q96I82 304 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 HS6ST2Q96MM7 605 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 KATNAL1Q9BW62 490 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 RNF26Q9BY78 433 aaPredicted RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 SAP30LQ9HAJ7 183 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 USP29Q9HBJ7 922 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 DACT1Q9NYF0 836 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 LRFN1Q9P244 771 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 FZD4Q9ULV1 537 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 NFU1Q9UMS0 254 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 SCAF8Q9UPN6 1271 aaKnown RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 FAM90A10PA6NDY2 464 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 IFRD1O00458 451 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 GCATO75600 419 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 USP1O94782 785 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 MBPP02686 304 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 ITGA2BP08514 1039 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 CYP2A6P11509 494 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 HOXD9P28356 352 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 IGHMBP2P38935 993 aaKnown RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 POLE2P56282 527 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 FOXO1Q12778 655 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 ERV3-1Q14264 604 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 KCNB1Q14721 858 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 GRM4Q14833 912 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 RBMS2Q15434 407 aaKnown RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 P3H1Q32P28 736 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 TMEM65Q6PI78 240 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 CCDC174Q6PII3 467 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 VSTM1Q6UX27 236 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 PIP4P1Q86T03 277 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 OR52L2PQ8NGH6 319 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 ADAMTS18Q8TE60 1221 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 WDR60Q8WVS4 1066 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 LTV1Q96GA3 475 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 HIC2Q96JB3 615 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 CCDC17Q96LX7 622 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 EPS8L2Q9H6S3 715 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 PTPRHQ9HD43 1115 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 KCNK9Q9NPC2 374 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 FBXO28Q9NVF7 368 aa3.98□□□□□ -1.77
PALB2-204ENST00000566069 UBE2J1Q9Y385 318 aaPredicted RBP3.98□□□□□ -1.77
PALB2-204ENST00000566069 SPATA31A1Q5TZJ5 1347 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 hCG_1642624A0A1W2PR95 340 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 CD8B2A6NJW9 211 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 GTPBP1O00178 669 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 ADAM10O14672 748 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 DNPH1O43598 174 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 RPP40O75818 363 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 TMEM191BP0C7N4 346 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 KLRK1P26718 216 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 DUSP1P28562 367 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 AKT1P31749 480 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 GALNSP34059 522 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 JAK3P52333 1124 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 RAE1P78406 368 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 MFSD13AQ14CX5 517 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 TRIM60Q495X7 471 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 C10orf25Q5T742 122 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 MEX3CQ5U5Q3 659 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 TANGO2Q6ICL3 276 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 LIN54Q6MZP7 749 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 RINT1Q6NUQ1 792 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 ERAP2Q6P179 960 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 ACSM6Q6P461 480 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 KRT27Q7Z3Y8 459 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 TRABD2AQ86V40 505 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 SLC22A17Q8WUG5 538 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 GLMPQ8WWB7 406 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 PRR11Q96HE9 360 aaPredicted RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 FAR2Q96K12 515 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 CAMK1GQ96NX5 476 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 RTKNQ9BST9 563 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 AGO4Q9HCK5 861 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 ABHD10Q9NUJ1 306 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 SEMA5BQ9P283 1151 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 HERC5Q9UII4 1024 aaKnown RBP3.97□□□□□ -1.77
PALB2-204ENST00000566069 PCDHB2Q9Y5E7 798 aa3.97□□□□□ -1.77
PALB2-204ENST00000566069 TMEM232C9JQI7 657 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 M0QZQ0 153 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 CLIC1O00299 241 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 FYB1O15117 783 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 ACTL6BO94805 426 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 CER1O95813 267 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 ALADP13716 330 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 CHKAP35790 457 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 GRK6P43250 576 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 WDR5P61964 334 aaKnown RBP3.96□□□□□ -1.78
PALB2-204ENST00000566069 CBFBQ13951 182 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 ATPAF1Q5TC12 328 aaPredicted RBP3.96□□□□□ -1.78
PALB2-204ENST00000566069 KLHL17Q6TDP4 642 aa3.96□□□□□ -1.78
PALB2-204ENST00000566069 USP43Q70EL4 1123 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms