RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NUSAP1Q9BXS6 441 aaKnown RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 NAT10Q9H0A0 1025 aaKnown RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 PCED1AQ9H1Q7 454 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 CALCOCO1Q9P1Z2 691 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 GGA2Q9UJY4 613 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 STAP1Q9ULZ2 295 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 CACNA1AO00555 2505 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 PAPSS1O43252 624 aaPredicted RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 NDUFS2O75306 463 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 ACADMP11310 421 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 PABPC1P11940 636 aaKnown RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 CCR1P32246 355 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 DHPSP49366 369 aaPredicted RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 ST8SIA6P61647 398 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 RPL6Q02878 288 aaKnown RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 CDH18Q13634 790 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 GEN1Q17RS7 908 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 RABGAP1LQ5R372 815 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 CCDC183Q5T5S1 534 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 DAB2IPQ5VWQ8 1189 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 PEAR1Q5VY43 1037 aaPredicted RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 SLC26A9Q7LBE3 791 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 SFTPA1Q8IWL2 248 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 ZNF397Q8NF99 534 aaPredicted RBP17.37■□□□□ 0.37
USB1-211ENST00000565662 SIX2Q9NPC8 291 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 CACNA2D2Q9NY47 1150 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 SUN2Q9UH99 717 aa17.37■□□□□ 0.37
USB1-211ENST00000565662 PIK3R2O00459 728 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 TRIM24O15164 1050 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 TRUB2O95900 331 aaKnown RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 IGLV3-25P01717 112 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 DLDP09622 509 aaKnown RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 UCHL3P15374 230 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 POLR2EP19388 210 aaKnown RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 NDUFV2P19404 249 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 CDH5P33151 784 aaPredicted RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 ATXN1P54253 815 aaKnown RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 MYL5Q02045 173 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 ZNF234Q14588 700 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 FAM133BQ5BKY9 247 aaKnown RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 KLHDC7AQ5VTJ3 777 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 SND1Q7KZF4 910 aaKnown RBP eCLIP17.36■□□□□ 0.37
USB1-211ENST00000565662 KIAA0907Q7Z7F0 614 aaPredicted RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 TAC4Q86UU9 113 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 FIBINQ8TAL6 211 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 CLEC4CQ8WTT0 213 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 PRCCQ92733 491 aaPredicted RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 FCRL2Q96LA5 508 aaPredicted RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 MRGPRX1Q96LB2 322 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 SLC2A13Q96QE2 648 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 EDEM2Q9BV94 578 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 STK33Q9BYT3 514 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 FAM204AQ9H8W3 233 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 PRDM16Q9HAZ2 1276 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 CD248Q9HCU0 757 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 POLR3BQ9NW08 1133 aaPredicted RBP17.36■□□□□ 0.37
USB1-211ENST00000565662 SCML1Q9UN30 329 aa17.36■□□□□ 0.37
USB1-211ENST00000565662 TNRC6BQ9UPQ9 1833 aaKnown RBP17.35■□□□□ 0.37
USB1-211ENST00000565662 F5H5T6 163 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 DCLK1O15075 740 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 TBL1XO60907 577 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 DAB1O75553 588 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 F9P00740 461 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 C7P10643 843 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 GNSP15586 552 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 HLA-FP30511 346 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 NOS2P35228 1153 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 IL12RB1P42701 662 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 SULT2A1Q06520 285 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 DRAP1Q14919 205 aaPredicted RBP17.35■□□□□ 0.37
USB1-211ENST00000565662 DCAF6Q58WW2 860 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 MS4A13Q5J8X5 152 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 WDR45BQ5MNZ6 344 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 CDKAL1Q5VV42 579 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 GJB7Q6PEY0 223 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 CHST9Q7L1S5 443 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 SIPA1Q96FS4 1042 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 ABCB8Q9NUT2 735 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 NAALADL1Q9UQQ1 740 aa17.35■□□□□ 0.37
USB1-211ENST00000565662 DMXL1Q9Y485 3027 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 IGHV1OR15-9A0A0B4J2B8 117 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 A0A1B0GVM2 712 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 TCAF2A6NFQ2 919 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 FOXN3O00409 490 aaPredicted RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 TSPAN3O60637 253 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 GABBR2O75899 941 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 IGLV3-19P01714 112 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 FYNP06241 537 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 EPHX1P07099 455 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 CCDC172P0C7W6 258 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 BCKDHBP21953 392 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 NNMTP40261 264 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 SLC6A3Q01959 620 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 DUOXA1Q1HG43 343 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 FUT11Q495W5 492 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 TTC31Q49AM3 519 aaPredicted RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 FNDC3BQ53EP0 1204 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 BRMS1LQ5PSV4 323 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms