RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	HEATR3	Q7Z4Q2	680 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	CCDC105	Q8IYK2	499 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	MAGEB6	Q8N7X4	407 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	SMRP1	Q8NCR6	262 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	C3orf20	Q8ND61	904 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	PPP1R35	Q8TAP8	253 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	CLIP3	Q96DZ5	547 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	TTC14	Q96N46	770 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	ZNF396	Q96N95	335 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	CGRRF1	Q99675	332 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	2e-8	■■■■□ 21.2
BBS4-208	ENST00000565160	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	BOLA2	Q9H3K6	86 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	METTL14	Q9HCE5	456 aa	Known RBP	4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	ANGPTL2	Q9UKU9	493 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	SLC45A2	Q9UMX9	530 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	USP15	Q9Y4E8	981 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	ASTN1	O14525	1302 aa		4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-208	ENST00000565160	MYH8	P13535	1937 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	KIAA1217	Q5T5P2	1943 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	SYCE3	A1L190	88 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	VPS37C	A5D8V6	355 aa	Predicted RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	HAUS5	O94927	633 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GJB5	O95377	273 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	PARN	O95453	639 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	LINC00271	P0C7V0	271 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MTHFD1	P11586	935 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	SYT1	P21579	422 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GCSH	P23434	173 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	RPS6KB1	P23443	525 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	WDR5	P61964	334 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NOMO3	P69849	1222 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	DMWD	Q09019	674 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	CHAF1A	Q13111	956 aa	Predicted RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GTF2H3	Q13889	308 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MLC1	Q15049	377 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NECTIN1	Q15223	517 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	RABL6	Q3YEC7	729 aa	Predicted RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NOMO2	Q5JPE7	1267 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	CPLX2	Q6PUV4	134 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	LRRC55	Q6ZSA7	311 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MTERF4	Q7Z6M4	381 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	DEFB128	Q7Z7B8	93 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	DPP9	Q86TI2	863 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	FMNL3	Q8IVF7	1028 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	CCDC83	Q8IWF9	413 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	RHOT2	Q8IXI1	618 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	ZNF276	Q8N554	614 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	FITM2	Q8N6M3	262 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	IL17RD	Q8NFM7	739 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	OR56A1	Q8NGH5	318 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GPT2	Q8TD30	523 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	SUSD6	Q92537	303 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	C1GALT1C1	Q96EU7	318 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GLT1D1	Q96MS3	346 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NEK1	Q96PY6	1258 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	DCLRE1C	Q96SD1	692 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MAP7D2	Q96T17	732 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MPHOSPH8	Q99549	860 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	ACO2	Q99798	780 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	ZSWIM1	Q9BR11	485 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	C1orf43	Q9BWL3	253 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	PANK2	Q9BZ23	570 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	SIL1	Q9H173	461 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	VPS11	Q9H270	941 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	SLC2A4RG	Q9NR83	387 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	DDX19A	Q9NUU7	478 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	KLHL11	Q9NVR0	708 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	GPRC5B	Q9NZH0	403 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	ABCF2	Q9UG63	623 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	CD207	Q9UJ71	328 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NOL7	Q9UMY1	257 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	PA2G4	Q9UQ80	394 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	POLH	Q9Y253	713 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	FPGT-TNNI3K	V9GXZ4	949 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	NOTCH2	Q04721	2471 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	CREBBP	Q92793	2442 aa		4.92	□□□□□ -1.62
BBS4-208	ENST00000565160	LOXHD1	Q8IVV2	1947 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	NF1	P21359	2839 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	PRSS29P	A6NIE9	313 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160		H3BNC9	293 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	SLC16A6	O15403	523 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	FIBP	O43427	364 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	STRN	O43815	780 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	SLC43A1	O75387	559 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	NCR1	O76036	304 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	CDKL5	O76039	1030 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	GLP2R	O95838	553 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	ELANE	P08246	267 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	ALAS1	P13196	640 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	AKR1A1	P14550	325 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	PRDX5	P30044	214 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	TPM4	P67936	248 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	CCNA1	P78396	465 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	NKX6-1	P78426	367 aa	Predicted RBP	4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	TRDN	Q13061	729 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	TUBA3C	Q13748	450 aa		4.91	□□□□□ -1.62
BBS4-208	ENST00000565160	CAMK1	Q14012	370 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms