RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 NCKAP1Q9Y2A7 1128 aa11.2□□□□□ -0.62
CFDP1-203ENST00000564286 BTBD3Q9Y2F9 522 aa11.2□□□□□ -0.62
CFDP1-203ENST00000564286 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.2□□□□□ -0.62
CFDP1-203ENST00000564286 GON4LQ3T8J9 2241 aa11.2□□□□□ -0.62
CFDP1-203ENST00000564286 PI4KAP42356 2102 aa11.2□□□□□ -0.62
CFDP1-203ENST00000564286 ADAMTS20P59510 1910 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 A0A087WV48 116 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 FAM149AA5PLN7 773 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 PDXKO00764 312 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 PCDHGA12O60330 932 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 DKK1O94907 266 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 SEMA4FO95754 770 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 NR3C1P04150 777 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 KRT13P13646 458 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 CD27P26842 260 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 ACSL1P33121 698 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 HNF1BP35680 557 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 ABCG1P45844 678 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 VAMP7P51809 220 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 C21orf59P57076 290 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 ZNF445P59923 1031 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 C19orf57Q0VDD7 668 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 SFSWAPQ12872 951 aaKnown RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 CAMK2GQ13555 558 aaPredicted RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 CUL4BQ13620 913 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 SMAD1Q15797 465 aaKnown RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 LRRC69Q6ZNQ3 347 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 TTC39CQ8N584 583 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 C1orf216Q8TAB5 229 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 GANCQ8TET4 914 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 WFIKKN2Q8TEU8 576 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 GOLGA1Q92805 767 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 PLD4Q96BZ4 506 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 UBL7Q96S82 380 aaPredicted RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 BACH2Q9BYV9 841 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 NIF3L1Q9GZT8 377 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 OLA1Q9NTK5 396 aaKnown RBP11.19□□□□□ -0.62
CFDP1-203ENST00000564286 USP3Q9Y6I4 520 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
CFDP1-203ENST00000564286 TSPAN3O60637 253 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 ATP5BP06576 529 aaKnown RBP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 CDK4P11802 303 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 PDIA4P13667 645 aaKnown RBP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 JUPP14923 745 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 ME1P48163 572 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 YWHAGP61981 247 aaKnown RBP eCLIP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 PDE4CQ08493 712 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 ZNF394Q53GI3 561 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 C6orf118Q5T5N4 469 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 PPP1R26Q5T8A7 1209 aaPredicted RBP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 TMPRSS12Q86WS5 348 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 MARCH9Q86YJ5 346 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 BIRC7Q96CA5 298 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 NXPE2Q96DL1 559 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 TMA16Q96EY4 203 aaKnown RBP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 P2RY11Q96G91 374 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 TWNKQ96RR1 684 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
CFDP1-203ENST00000564286 UBXN6Q9BZV1 441 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 SGK2Q9HBY8 427 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 SUN2Q9UH99 717 aa11.18□□□□□ -0.62
CFDP1-203ENST00000564286 H0Y8X5 98 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 KCNK3O14649 394 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 RRP8O43159 456 aaKnown RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 RNASEH1O60930 286 aaKnown RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 ZBED1O96006 694 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 ABCB4P21439 1286 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 STK4Q13043 487 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 PTPRNQ16849 979 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 ZNF776Q68DI1 518 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 INTS8Q75QN2 995 aaKnown RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 CHST9Q7L1S5 443 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 CYB5D2Q8WUJ1 264 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 BBC3Q96PG8 261 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 TMEM245Q9H330 911 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 ABCB8Q9NUT2 735 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 CLEC4EQ9ULY5 219 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 SCML1Q9UN30 329 aa11.17□□□□□ -0.62
CFDP1-203ENST00000564286 FASNP49327 2511 aaKnown RBP11.17□□□□□ -0.62
CFDP1-203ENST00000564286 MYO18AQ92614 2054 aaKnown RBP11.16□□□□□ -0.62
CFDP1-203ENST00000564286 FAM47DPA6NHR8 397 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 PLK4O00444 970 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 MAPK13O15264 365 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-203ENST00000564286 ITGAVP06756 1048 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 DLDP09622 509 aaKnown RBP11.16□□□□□ -0.62
CFDP1-203ENST00000564286 C1SP09871 688 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 SLFN14P0C7P3 912 aa11.16□□□□□ -0.62
CFDP1-203ENST00000564286 POLR2EP19388 210 aaKnown RBP11.16□□□□□ -0.62
CFDP1-203ENST00000564286 RPL13P26373 211 aaKnown RBP11.16□□□□□ -0.62
CFDP1-203ENST00000564286 HOXD9P28356 352 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms