RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CYP3A5P20815 502 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 GUCY2CP25092 1073 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 MAPK10P53779 464 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 SFSWAPQ12872 951 aaKnown RBP11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 SLC10A6Q3KNW5 377 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 Q8NA96 180 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 NAT6Q93015 286 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 C14orf79Q96F83 325 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 ZMYND12Q9H0C1 365 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 INTS2Q9H0H0 1204 aaKnown RBP11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 CAAP1Q9H8G2 361 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 CROTQ9UKG9 612 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 TLK1Q9UKI8 766 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 VAV3Q9UKW4 847 aa11.26□□□□□ -0.61
HDGFL3-204ENST00000563790 A0A0B4J269 797 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 PPEF2O14830 753 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 MUSKO15146 869 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ITGB3P05106 788 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 MX1P20591 662 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 UGT1A3P35503 534 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ARSDP51689 593 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 MFAP3P55082 362 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ANTXR2P58335 489 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 YBX1P67809 324 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 MC1RQ01726 317 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ELOAQ14241 798 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 NR0B2Q15466 257 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ZNF568Q3ZCX4 644 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 METTL23Q86XA0 190 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 CACNA2D3Q8IZS8 1091 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 GOLGA1Q92805 767 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 RANBP9Q96S59 729 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 TTLL2Q9BWV7 592 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 ELOVL2Q9NXB9 296 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 FBXL12Q9NXK8 326 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 SERGEFQ9UGK8 458 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 SALL4Q9UJQ4 1053 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 SCML1Q9UN30 329 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
HDGFL3-204ENST00000563790 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 USP46P62068 366 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 TSPY1Q01534 308 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 MIIPQ5JXC2 388 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 TPGS1Q6ZTW0 290 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 WBP2Q969T9 261 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 GFM1Q96RP9 751 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 HAPLN3Q96S86 360 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 TARS2Q9BW92 718 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 PABPC3Q9H361 631 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 MCCC2Q9HCC0 563 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 UBQLN1Q9UMX0 589 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 NEU2Q9Y3R4 380 aa11.24□□□□□ -0.61
HDGFL3-204ENST00000563790 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CYP3A7-CYP3A51PA0A087WV96 503 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 TARSL2A2RTX5 802 aaKnown RBP11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 H3BM21 787 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 MCF2P10911 925 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 PDCP20941 246 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CYP3A7P24462 503 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 EFNA5P52803 228 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 EPHA7Q15375 998 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CFAP221Q4G0U5 840 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 VWA2Q5GFL6 755 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 ZNF776Q68DI1 518 aaPredicted RBP11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 NXPE1Q8N323 547 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 GANCQ8TET4 914 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 IFT43Q96FT9 208 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 KLHDC7BQ96G42 594 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 SPATA17Q96L03 361 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CEP295NLQ96MC4 621 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 CMKLR1Q99788 373 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 SMR3AQ99954 134 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 FOXC2Q99958 501 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 GPN2Q9H9Y4 310 aaPredicted RBP11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
HDGFL3-204ENST00000563790 KCNN4O15554 427 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 KRT86O43790 486 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 ABL1P00519 1130 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 F12P00748 615 aaPredicted RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 VAV1P15498 845 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 NUDT1P36639 197 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms