RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 HDCP19113 662 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 CHRNA3P32297 505 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 USP8P40818 1118 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 PPP3CCP48454 512 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 NCOA4Q13772 614 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF699Q32M78 642 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 EMC10Q5UCC4 262 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ERMP1Q7Z2K6 904 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 LONP2Q86WA8 852 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 TAS1R2Q8TE23 839 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 IFT81Q8WYA0 676 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 SEMA4DQ92854 862 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ATP2A3Q93084 1043 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF518BQ9C0D4 1074 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ECT2Q9H8V3 914 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 DUS2Q9NX74 493 aaKnown RBP16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 WNT6Q9Y6F9 365 aa16.8■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF840PA6NDX5 716 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 CYP26A1O43174 497 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 FGGP02679 453 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 GJA4P35212 333 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 IFNAR2P48551 515 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 CDH8P55286 799 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 CLEC16AQ2KHT3 1053 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 EML3Q32P44 896 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF667Q5HYK9 610 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 LAIR1Q6GTX8 287 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 TAS2R14Q9NYV8 317 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 RAB23Q9ULC3 237 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 EML5Q05BV3 1969 aa16.79■□□□□ 0.28
LPCAT4-205ENST00000563748 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 CLDN5O00501 218 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 HRO43593 1189 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 EGFP01133 1207 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 DRD1P21728 446 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 CNR2P34972 360 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 SLC1A1P43005 524 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 SLC7A9P82251 487 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 ZXDBP98169 803 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 HLTFQ14527 1009 aaKnown RBP eCLIP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 NAIF1Q69YI7 327 aaPredicted RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 TTC16Q8NEE8 873 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF564Q8TBZ8 553 aaPredicted RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 DDX1Q92499 740 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 PCDHB18PQ96TA0 734 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 P2RY13Q9BPV8 354 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 FBRSL1Q9HCM7 1045 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 GMEB2Q9UKD1 530 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 CNTN6Q9UQ52 1028 aa16.78■□□□□ 0.28
LPCAT4-205ENST00000563748 GOLGA6L10A6NI86 522 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SRRM3A6NNA2 597 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 ATG13O75143 517 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 PHF2O75151 1096 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 OLFM2O95897 454 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 TGM1P22735 817 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 HOXC13P31276 330 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 GALK1P51570 392 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SKOR1P84550 965 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 TAF10Q12962 218 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 CYP1B1Q16678 543 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 HEATR6Q6AI08 1181 aaKnown RBP16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 PAQR9Q6ZVX9 377 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SLC47A2Q86VL8 602 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 KIAA1958Q8N8K9 716 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 TSEN2Q8NCE0 465 aaKnown RBP16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 CD101Q93033 1021 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 ELMO3Q96BJ8 720 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 ZNF653Q96CK0 615 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 RNF38Q9H0F5 515 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 PCYOX1Q9UHG3 505 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 PCDHA3Q9Y5H8 950 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 RALGAPA1Q6GYQ0 2036 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 SPAG17Q6Q759 2223 aa16.77■□□□□ 0.28
LPCAT4-205ENST00000563748 LEFTY2O00292 366 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 OAS1P00973 400 aaKnown RBP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 MMEP08473 750 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 P4HA1P13674 534 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 MAN1A1P33908 653 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 EIF3BP55884 814 aaKnown RBP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 DR1Q01658 176 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 PTP4A2Q12974 167 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 SRSF5Q13243 272 aaKnown RBP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 SIM2Q14190 667 aaPredicted RBP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 PUM1Q14671 1186 aaKnown RBP eCLIP16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 LPAL2Q16609 132 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 ZSCAN26Q16670 478 aa16.77■□□□□ 0.27
LPCAT4-205ENST00000563748 PRR23BQ6ZRT6 265 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms