RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 KLHL17Q6TDP4 642 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 CYP26C1Q6V0L0 522 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 MOGAT3Q86VF5 341 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 C2CD5Q86YS7 1000 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 P3H2Q8IVL5 708 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM71DQ8N9W8 422 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 OR52L2PQ8NGH6 319 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 CSGALNACT1Q8TDX6 532 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC22A17Q8WUG5 538 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 GLMPQ8WWB7 406 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 DDB2Q92466 427 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FYTTD1Q96QD9 318 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 RNF26Q9BY78 433 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 PABPC3Q9H361 631 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FBXO9Q9UK97 447 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 UBE2J1Q9Y385 318 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 LRRFIP2Q9Y608 721 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 CCDC187A0A096LP49 1063 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 LOC105369274A0A096LPK9 316 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 LOC102723532A0A0G2JNH3 316 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 WDR91A4D1P6 747 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 TISP43B9A030 160 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 B9A039 149 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 POC1B-GALNT4F8VUJ3 575 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 EYA2O00167 538 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 EXOC3O60645 756 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 RPP40O75818 363 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CER1O95813 267 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 RXRAP19793 462 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 DUSP1P28562 367 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 GALNSP34059 522 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 IGHMBP2P38935 993 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 JAK3P52333 1124 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 COPB1P53618 953 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 AP2B1P63010 937 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 RAE1P78406 368 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 TFF2Q03403 129 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 BFSP2Q13515 415 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CUL4BQ13620 913 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 PROSER3Q2NL68 480 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 BTBD16Q32M84 506 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 P3H1Q32P28 736 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 TTC22Q5TAA0 569 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 ATPAF1Q5TC12 328 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CLEC4GQ6UXB4 293 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 RAB11FIP2Q7L804 512 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 TICAM2Q86XR7 235 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CCDC117Q8IWD4 279 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 OR4N4Q8N0Y3 316 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 GALNT4Q8N4A0 578 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 SEMA6DQ8NFY4 1073 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 MAFAQ8NHW3 353 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 SCAMP5Q8TAC9 235 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 ADAMTS18Q8TE60 1221 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 AFG1LQ8WV93 481 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 EIF3CQ99613 913 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CDCP1Q9H5V8 836 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 SEPSECSQ9HD40 501 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 FBXO28Q9NVF7 368 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 SH3BP4Q9P0V3 963 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF70Q9UC06 446 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 SRP68Q9UHB9 627 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 DAPP1Q9UN19 280 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 CNTN6Q9UQ52 1028 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 ZBTB1Q9Y2K1 713 aa3.69□□□□□ -1.82
SHCBP1-202ENST00000563219 DYTNA2CJ06 578 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 PRRT4C9JH25 899 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 NKX2-8O15522 239 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM155BO75949 473 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 KRT38O76015 456 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 LARGE1O95461 756 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 CHRM5P08912 532 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ATP1A3P13637 1013 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ALADP13716 330 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ITGB6P18564 788 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 BDNFP23560 247 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ARL4CP56559 192 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 SSBP2P81877 361 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 KCNB1Q14721 858 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 SRSF7Q16629 238 aaKnown RBP eCLIP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 AAK1Q2M2I8 961 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 NFRKBQ6P4R8 1299 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 C16orf89Q6UX73 402 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 DCDC5Q6ZRR9 648 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 RINLQ6ZS11 566 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 RFX8Q6ZV50 586 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 RSRC2Q7L4I2 434 aaKnown RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 KRT27Q7Z3Y8 459 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ESX1Q8N693 406 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 PPHLN1Q8NEY8 458 aaKnown RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF398Q8TD17 642 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ASB12Q8WXK4 309 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms