RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 UBA3Q8TBC4 463 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 PAGE5Q96GU1 130 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 NAF1Q96HR8 494 aaKnown RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 ZNF396Q96N95 335 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 ORAI3Q9BRQ5 295 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 NIF3L1Q9GZT8 377 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 BTBD1Q9H0C5 482 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 GGA2Q9UJY4 613 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 AK5Q9Y6K8 562 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 A0A1W2PP55 124 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 MID1O15344 667 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 TBL1XO60907 577 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 IGLV3-19P01714 112 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 RPN1P04843 607 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 IGHV4-34P06331 123 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 LCP1P13796 627 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 JUPP14923 745 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CTSOP43234 321 aaPredicted RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CTSKP43235 329 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 GRK6P43250 576 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 RGS7P49802 495 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 AP3M2P53677 418 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 C21orf59P57076 290 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 PKP1Q13835 747 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 RESP18Q5W5W9 173 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 MBLAC2Q68D91 279 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 NCEH1Q6PIU2 408 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 BHLHA9Q7RTU4 235 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 GALNT15Q8N3T1 639 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 DCLK3Q9C098 648 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 TMEM245Q9H330 911 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 AASDHPPTQ9NRN7 309 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 ZNF510Q9Y2H8 683 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
NSMCE1-202ENST00000561960 BOD1L1Q8NFC6 3051 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 A0A1B0GVL5 298 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 YJEFN3A6XGL0 299 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 E7ENQ6 273 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 ENC1O14682 589 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SDC3O75056 442 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SIN3BO75182 1162 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 ZBED1O96006 694 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 ABCB4P21439 1286 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 NR2F2P24468 414 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CD27P26842 260 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SLC6A4P31645 630 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 GRIA4P48058 902 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 PSMD8P48556 350 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 METAP1P53582 386 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 BCAT1P54687 386 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 RAD23BP54727 409 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SNRPFP62306 86 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 PDE4CQ08493 712 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 LRMPQ12912 555 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 BNIP3Q12983 259 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SHBQ15464 509 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 POM121L1PQ3SYA9 428 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 MPPE1Q53F39 396 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 HES3Q5TGS1 186 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CFAP52Q8N1V2 620 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 GOLGA5Q8TBA6 731 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CLEC4CQ8WTT0 213 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 TAF4BQ92750 862 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 IGSF8Q969P0 613 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 COL26A1Q96A83 441 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CLIC5Q9NZA1 410 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CGNQ9P2M7 1197 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 CA5BQ9Y2D0 317 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms